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SCNpilot_cont_750_bf_scaffold_718

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_718_1
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1..1641
DNA (1641bp) protein (547aa)
Putative acyl-CoA dehydrogenase {ECO:0000313|EMBL:KJL36587.1}; EC=1.3.99.- {ECO:0000313|EMBL:KJL36587.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
acyl-CoA dehydrogenase; K00232 acyl-CoA oxidase [EC:1.3.3.6]
acyl-CoA dehydrogenase n=1 Tax=Microbacterium yannicii RepID=UPI0002D5AD3F rbh
SCNpilot_cont_750_bf_scaffold_718_2
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1676..2254
DNA (579bp) protein (193aa)
DNA-3-methyladenine glycosylase 1 {ECO:0000313|EMBL:KJL36586.1}; EC=3.2.2.20 {ECO:0000313|EMBL:KJL36586.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
tag; 3-methyladenine DNA glycosylase (EC:3.2.2.20) rbh
3-methyladenine DNA glycosylase n=1 Tax=Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM 6432 / NBRC 12425 / NCIMB 8070) RepID=K7RUL7_PROA4 rbh
SCNpilot_cont_750_bf_scaffold_718_3
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2272..2742)
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00030DA6D8
Uncharacterized protein {ECO:0000313|EMBL:KJL36585.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
dehydrogenase with different specificities
SCNpilot_cont_750_bf_scaffold_718_4
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2788..4515)
DNA (1728bp) protein (576aa)
NhaP-type Na+/H+ and K+/H+ antiporters n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NGI4_MICTS
Sodium, potassium, lithium and rubidium/H(+) antiporter {ECO:0000313|EMBL:KJL36584.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
NhaP-type Na+/H+ and K+/H+ antiporters; K03316 monovalent cation:H+ antiporter, CPA1 family
SCNpilot_cont_750_bf_scaffold_718_5
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4555..5583
DNA (1029bp) protein (343aa)
Proline iminopeptidase {ECO:0000256|RuleBase:RU003421}; EC=3.4.11.5 {ECO:0000256|RuleBase:RU003421};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
Proline iminopeptidase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E919_9MICO rbh
prolyl aminopeptidase
SCNpilot_cont_750_bf_scaffold_718_6
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5586..7199)
DNA (1614bp) protein (538aa)
Alcohol dehydrogenase [acceptor] {ECO:0000313|EMBL:KJL36582.1}; EC=1.1.99.- {ECO:0000313|EMBL:KJL36582.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
choline dehydrogenase; K00119 [EC:1.1.99.-] rbh
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AG33_9MICO rbh
SCNpilot_cont_750_bf_scaffold_718_7
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7196..8929)
DNA (1734bp) protein (578aa)
NAD/NADP-dependent betaine aldehyde dehydrogenase {ECO:0000313|EMBL:KJL36581.1}; EC=1.2.1.8 {ECO:0000313|EMBL:KJL36581.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034DF6B5
aldehyde dehydrogenase
SCNpilot_cont_750_bf_scaffold_718_8
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9039..9299)
DNA (261bp) protein (87aa)
Putative glutaredoxin.1 {ECO:0000313|EMBL:KJL36580.1}; EC=1.-.-.- {ECO:0000313|EMBL:KJL36580.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
Glutaredoxin n=1 Tax=Microbacterium sp. TS-1 RepID=U2YMF4_9MICO
glutaredoxin
SCNpilot_cont_750_bf_scaffold_718_9
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9463..10620
DNA (1158bp) protein (386aa)
Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase {ECO:0000313|EMBL:KJL36579.1}; EC=2.4.2.53 {ECO:0000313|EMBL:KJL36579.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
glycosyltransferase; K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83] rbh
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000378747E
SCNpilot_cont_750_bf_scaffold_718_10
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(10635..11750)
DNA (1116bp) protein (372aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037FF8E6 rbh
Xylanase {ECO:0000313|EMBL:KEP74174.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
xylanase/chitin deacetylase rbh
SCNpilot_cont_750_bf_scaffold_718_11
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11914..13614
DNA (1701bp) protein (567aa)
Acetyl-coenzyme A synthetase {ECO:0000313|EMBL:KJL36578.1}; EC=6.2.1.1 {ECO:0000313|EMBL:KJL36578.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
putative acyl-CoA synthetase; K01895 acetyl-CoA synthetase [EC:6.2.1.1]
Acetyl-coenzyme A synthetase n=1 Tax=Microbacterium sp. TS-1 RepID=U2XK92_9MICO rbh
SCNpilot_cont_750_bf_scaffold_718_12
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13616..14275)
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI0003746DDE
Tetracycline repressor protein class E {ECO:0000313|EMBL:KJL36577.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
tetR; TetR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_718_13
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14341..14952
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000375FCF8
Biotin transporter BioY {ECO:0000313|EMBL:KJL36576.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
bioY; hypothetical protein; K03523 putative biotin biosynthesis protein BioY
SCNpilot_cont_750_bf_scaffold_718_14
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14960..15655
DNA (696bp) protein (232aa)
Biotin transport ATP-binding protein BioM {ECO:0000313|EMBL:KJL36575.1}; EC=3.6.3.- {ECO:0000313|EMBL:KJL36575.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
ABC-transporter, ATP-binding protein n=1 Tax=Leifsonia xyli subsp. xyli (strain CTCB07) RepID=Q6ACV4_LEIXX
cbiO; ABC-transporter, ATP-binding protein; K02006 cobalt/nickel transport system ATP-binding protein
SCNpilot_cont_750_bf_scaffold_718_15
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15649..16245
DNA (597bp) protein (199aa)
Cobalt transport protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RLF0_LEIAQ
Energy-coupling factor transporter transmembrane protein BioN {ECO:0000313|EMBL:KJL36574.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
cbiQ; ABC-type cobalt transport system, permease; K02008 cobalt/nickel transport system permease protein
SCNpilot_cont_750_bf_scaffold_718_16
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16305..17390)
DNA (1086bp) protein (362aa)
ABC transporter substrate-binding protein n=1 Tax=Streptomyces collinus Tu 365 RepID=S5VPE9_STRCU rbh
NMT1/THI5 like protein {ECO:0000313|EMBL:KJL36573.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
ABC transporter substrate-binding protein rbh
SCNpilot_cont_750_bf_scaffold_718_17
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17484..18353)
DNA (870bp) protein (290aa)
Binding-protein-dependent transport system inner membrane protein n=1 Tax=Streptomyces collinus Tu 365 RepID=S5V3S9_STRCU rbh
Putative aliphatic sulfonates transport permease protein SsuC {ECO:0000313|EMBL:KJL36572.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
binding-protein-dependent transport system inner membrane protein rbh
SCNpilot_cont_750_bf_scaffold_718_18
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18350..19192)
DNA (843bp) protein (281aa)
Bicarbonate transport ATP-binding protein CmpD {ECO:0000313|EMBL:KJL36571.1}; EC=3.6.3.- {ECO:0000313|EMBL:KJL36571.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
Uncharacterized protein n=1 Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6KA35_STRRC rbh
ABC transporter rbh
SCNpilot_cont_750_bf_scaffold_718_19
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19388..20977
DNA (1590bp) protein (530aa)
Sensor histidine kinase DcuS {ECO:0000313|EMBL:KJL36570.1}; EC=2.7.13.3 {ECO:0000313|EMBL:KJL36570.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
signal transduction histidine kinase regulating citrate/malate metabolism; K02476 two-component system, CitB family, sensor kinase [EC:2.7.13.3] rbh
Signal transduction histidine kinase regulating citrate/malate metabolism n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J2F0_FRASU rbh
SCNpilot_cont_750_bf_scaffold_718_20
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20974..21681
DNA (708bp) protein (236aa)
Transcriptional regulatory protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QAY5_CATAD
Transcriptional regulatory protein {ECO:0000256|PIRNR:PIRNR006171}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
response regulator receiver
SCNpilot_cont_750_bf_scaffold_718_21
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21684..22445)
DNA (762bp) protein (254aa)
Putative oxidoreductase {ECO:0000313|EMBL:KJL36568.1}; EC=1.-.-.- {ECO:0000313|EMBL:KJL36568.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
oxidoreductase n=1 Tax=Humibacter albus RepID=UPI0003B4FCC3 rbh
short-chain dehydrogenase/reductase SDR rbh
SCNpilot_cont_750_bf_scaffold_718_22
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22472..23320)
DNA (849bp) protein (283aa)
Putative transcriptional regulator n=1 Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YS40_NOCFA
HTH-type quorum sensing-dependent transcriptional regulator VjbR {ECO:0000313|EMBL:KJL36567.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
transcriptional regulator
SCNpilot_cont_750_bf_scaffold_718_23
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23442..24092
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI000360EF7B
Inner membrane protein YaaH {ECO:0000313|EMBL:KJL36566.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
GPR1/FUN34/yaaH family protein
SCNpilot_cont_750_bf_scaffold_718_24
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24095..26065
DNA (1971bp) protein (657aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-Rule:MF_01123};; Acetate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_01123}; Acyl-activating enzyme {ECO:0000256|HAMAP-Rule:MF_01123}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
acetate/CoA ligase; K01895 acetyl-CoA synthetase [EC:6.2.1.1] rbh
Acetyl-coenzyme A synthetase n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PVT8_KRIFD rbh
SCNpilot_cont_750_bf_scaffold_718_25
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26128..26307)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1ARH7_RHOOB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH48654.1}; TaxID=632772 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (strain B4).;"
Displaying 25 items

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