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SCNpilot_cont_750_bf_scaffold_2087

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_2087_1
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..505)
DNA (504bp) protein (168aa)
Formamidopyrimidine-DNA glycosylase 1 {ECO:0000313|EMBL:KJL35336.1}; EC=3.2.2.23 {ECO:0000313|EMBL:KJL35336.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
formamidopyrimidine-DNA glycosylase; K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003731035
SCNpilot_cont_750_bf_scaffold_2087_2
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(525..1217)
DNA (693bp) protein (231aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
rnc; dsRNA-specific ribonuclease; K03685 ribonuclease III [EC:3.1.26.3] rbh
ribonuclease III n=1 Tax=Microbacterium sp. 11MF RepID=UPI00036FD071 rbh
SCNpilot_cont_750_bf_scaffold_2087_3
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1228..1437)
DNA (210bp) protein (70aa)
50S ribosomal protein L32 n=2 Tax=Microbacterium RepID=E8NCX7_MICTS
rpmF; 50S ribosomal protein L32; K02911 large subunit ribosomal protein L32
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
SCNpilot_cont_750_bf_scaffold_2087_4
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1455..2018)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002D4E7A5
Uncharacterized protein {ECO:0000313|EMBL:KJL35339.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein; K07040 uncharacterized protein
SCNpilot_cont_750_bf_scaffold_2087_5
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2057..2554)
DNA (498bp) protein (166aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
coaD; phosphopantetheine adenylyltransferase; K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
phosphopantetheine adenylyltransferase n=1 Tax=Microbacterium RepID=UPI0003606401
SCNpilot_cont_750_bf_scaffold_2087_6
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2597..4747)
DNA (2151bp) protein (717aa)
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:KJL35341.1}; EC=3.6.4.12 {ECO:0000313|EMBL:KJL35341.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
recG; RecG-like helicase; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12]
ATP-dependent DNA helicase RecG n=1 Tax=Microbacterium yannicii RepID=UPI000300301A
SCNpilot_cont_750_bf_scaffold_2087_7
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4798..5379
DNA (582bp) protein (194aa)
Ribosomal RNA small subunit methyltransferase D {ECO:0000313|EMBL:KJL35342.1}; EC=2.1.1.171 {ECO:0000313|EMBL:KJL35342.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
N6-adenine-specific methylase; K08316 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000368583F
SCNpilot_cont_750_bf_scaffold_2087_8
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5376..6368)
DNA (993bp) protein (331aa)
Thiamine-monophosphate kinase {ECO:0000313|EMBL:KJL35343.1}; EC=2.7.4.16 {ECO:0000313|EMBL:KJL35343.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
thiamine monophosphate kinase; K00946 thiamine-monophosphate kinase [EC:2.7.4.16] rbh
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00030B2087 rbh
SCNpilot_cont_750_bf_scaffold_2087_9
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6429..6914
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2X6I5_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL35344.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_2087_10
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6918..7937)
DNA (1020bp) protein (340aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
ddl; D-alanine-D-alanine ligase (EC:6.3.2.4)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00037B410D rbh
SCNpilot_cont_750_bf_scaffold_2087_11
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7921..8799)
DNA (879bp) protein (293aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
gpsA; glycerol-3-phosphate dehydrogenase; K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
glycerol-3-phosphate dehydrogenase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000367B047
Displaying 11 items

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