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SCNpilot_cont_750_bf_scaffold_1129

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_1129_1
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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66..353
DNA (288bp) protein (96aa)
Transposase n=1 Tax=Sphingobium lactosutens DS20 RepID=T0IXX8_9SPHN
Transposase {ECO:0000313|EMBL:KKC33034.1}; Flags: Fragment;; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
putative integrase
SCNpilot_cont_750_bf_scaffold_1129_2
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(587..1633)
DNA (1047bp) protein (349aa)
Alpha/beta hydrolase fold-3 domain protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UND9_METS4 rbh
Aes protein {ECO:0000313|EMBL:BAQ48531.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
alpha/beta hydrolase domain-containing protein rbh
SCNpilot_cont_750_bf_scaffold_1129_3
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1707..2714
DNA (1008bp) protein (336aa)
alkane 1-monooxygenase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002D64957
Luciferase family oxidoreductase {ECO:0000313|EMBL:EHK59109.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1129_4
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2729..3280)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036EA54C
MFS transporter {ECO:0000313|EMBL:CDN58371.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
major facilitator superfamily transporter
SCNpilot_cont_750_bf_scaffold_1129_5
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3398..4735)
DNA (1338bp) protein (446aa)
hsdS; type I restriction-modification system specificity subunit (EC:2.1.1.72 3.1.21.3); K01154 type I restriction enzyme, S subunit [EC:3.1.21.3] rbh
Restriction endonuclease n=2 Tax=Pseudomonas aeruginosa RepID=V4UY53_PSEAI rbh
Restriction endonuclease {ECO:0000313|EMBL:EVT88468.1}; TaxID=1441931 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA09.;"
SCNpilot_cont_750_bf_scaffold_1129_6
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4732..5778)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IR36_RHOCS rbh
hypothetical protein rbh
Conserved protein {ECO:0000313|EMBL:GAK46877.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
SCNpilot_cont_750_bf_scaffold_1129_7
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5795..6445)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3A676_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
SCNpilot_cont_750_bf_scaffold_1129_8
Mesorhizobium sp. L103C565B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6442..8277)
DNA (1836bp) protein (612aa)
Type I restriction-modification system methyltransferase subunit (EC:2.1.1.72)
UPI0003CFEB54 related cluster n=1 Tax=unknown RepID=UPI0003CFEB54
Restriction endonuclease subunit M {ECO:0000313|EMBL:ESZ47784.1}; TaxID=1287094 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C565B0.;"
SCNpilot_cont_750_bf_scaffold_1129_9
unknown

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comp(8900..9964)
DNA (1065bp) protein (355aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1129_10
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9978..11036)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J008_ACIMA
Site-specific recombinase XerD {ECO:0000313|EMBL:KDM68272.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1129_11
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11044..12939)
DNA (1896bp) protein (632aa)
Phage integrase family protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J007_ACIMA
Phage integrase family protein {ECO:0000313|EMBL:KDM68271.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
phage integrase family protein
SCNpilot_cont_750_bf_scaffold_1129_12
unknown

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comp(13088..13369)
DNA (282bp) protein (94aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1129_13
unknown

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comp(13676..14533)
DNA (858bp) protein (286aa)

This feature has no annotations

Displaying 13 items

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