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SCNpilot_cont_750_bf_scaffold_50

Search features with annotation key words

Displaying items 1-30 of 214 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_50_1
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

119..976
DNA (858bp) protein (286aa)
Virulence-associated protein E n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3ST71_NITWN
Virulence-associated E {ECO:0000313|EMBL:GAN76270.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
virulence-associated protein E
SCNpilot_cont_750_bf_scaffold_50_2
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

969..2516
DNA (1548bp) protein (516aa)
hypothetical protein n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI0003B66A4C rbh
Uncharacterized protein {ECO:0000313|EMBL:KFI27650.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter massiliensis.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_50_3
unknown

Not on your lists

2500..2985
DNA (486bp) protein (162aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_50_4
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2982..3446
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5G0W3_ACICJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ31495.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
SCNpilot_cont_750_bf_scaffold_50_5
Acinetobacter sp. NIPH 2171, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3465..3866
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Acinetobacter sp. NIPH 2171 RepID=N9P416_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ENX08870.1}; TaxID=1217693 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. NIPH 2171.;"
hypothetical protein; K07474 phage terminase small subunit
SCNpilot_cont_750_bf_scaffold_50_6
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3870..4187
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) RepID=C5B0S8_METEA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS41665.1}; TaxID=272630 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1).;"
SCNpilot_cont_750_bf_scaffold_50_7
unknown

Not on your lists

4304..5032
DNA (729bp) protein (243aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_50_8
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5284..7065)
DNA (1782bp) protein (594aa)
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:EFH12667.1}; EC=3.1.-.- {ECO:0000313|EMBL:EFH12667.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
single-stranded-DNA-specific exonuclease RecJ; K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] rbh
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RJ50_9PROT rbh
SCNpilot_cont_750_bf_scaffold_50_9
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7067..8062)
DNA (996bp) protein (332aa)
glpX; fructose 1,6-bisphosphatase II (EC:3.1.3.11); K02446 fructose-1,6-bisphosphatase II [EC:3.1.3.11] rbh
Fructose-1,6-bisphosphatase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BSA5_GRABC rbh
Fructose-1,6-bisphosphatase {ECO:0000256|PIRNR:PIRNR004532}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
SCNpilot_cont_750_bf_scaffold_50_10
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8258..9550)
DNA (1293bp) protein (431aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
putative aminotransferase aatC (EC:2.6.1.-); K00003 homoserine dehydrogenase [EC:1.1.1.3]
Homoserine dehydrogenase n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RJ48_9PROT rbh
SCNpilot_cont_750_bf_scaffold_50_11
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9547..10764)
DNA (1218bp) protein (406aa)
aminotransferase; K14261 alanine-synthesizing transaminase [EC:2.6.1.-] rbh
Aminotransferase class I and II n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9HCQ6_GLUDA rbh
Aminotransferase {ECO:0000313|EMBL:GAN79984.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
SCNpilot_cont_750_bf_scaffold_50_12
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10883..11989)
DNA (1107bp) protein (369aa)
Putative uncharacterized protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BS71_GRABC
Uncharacterized protein {ECO:0000313|EMBL:AHJ63322.1}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_50_13
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12080..13906
DNA (1827bp) protein (609aa)
poly(R)-hydroxyalkanoic acid synthase; K03821 polyhydroxyalkanoate synthase [EC:2.3.1.-]
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037681E8
Poly-beta-hydroxybutyrate polymerase/poly(3-hydroxyalkanoate) polymerase {ECO:0000313|EMBL:GAN78189.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_cont_750_bf_scaffold_50_14
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14015..14806
DNA (792bp) protein (264aa)
Uncharacterized protein n=2 Tax=Labrenzia RepID=U7G8I8_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:ERP93782.1}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia sp. C1B10.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_50_15
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14814..16643)
DNA (1830bp) protein (610aa)
Sodium/hydrogen exchanger n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IMW2_METNO
sodium/hydrogen exchanger; K03455 monovalent cation:H+ antiporter-2, CPA2 family
Sodium/hydrogen exchanger {ECO:0000313|EMBL:ACL60305.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_cont_750_bf_scaffold_50_16
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16742..17614)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036F4EFE
Transglutaminase-like protein {ECO:0000313|EMBL:EHM00602.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
transglutaminase-like enzymes, putative cysteine proteases
SCNpilot_cont_750_bf_scaffold_50_17
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17611..20130)
DNA (2520bp) protein (840aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003760742 rbh
Uncharacterized protein {ECO:0000313|EMBL:EHM00603.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_50_18
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20144..23506)
DNA (3363bp) protein (1121aa)
Transglutaminase-like protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A163_9PROT
Transglutaminase-like protein {ECO:0000313|EMBL:EHM00604.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
transglutaminase-like protein rbh
SCNpilot_cont_750_bf_scaffold_50_19
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23509..24645)
DNA (1137bp) protein (379aa)
FAD dependent oxidoreductase n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RLU8_9PROT
FAD dependent oxidoreductase {ECO:0000313|EMBL:EFH11724.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
putative FAD dependent oxidoreductase
SCNpilot_cont_750_bf_scaffold_50_20
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24673..26016)
DNA (1344bp) protein (448aa)
TRAP dicarboxylate transporter subunit DctM n=1 Tax=Methylobacterium sp. GXF4 RepID=I9WX15_9RHIZ
TRAP dicarboxylate transporter subunit DctM
TRAP dicarboxylate transporter subunit DctM {ECO:0000313|EMBL:EIZ85126.1}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
SCNpilot_cont_750_bf_scaffold_50_21
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26013..26561)
DNA (549bp) protein (183aa)
C4-dicarboxylate ABC transporter permease n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI00037CA89A
tripartite ATP-independent periplasmic transporter DctQ
Tripartite ATP-independent periplasmic transporter DctQ component {ECO:0000313|EMBL:ACA20308.1}; Flags: Precursor;; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_cont_750_bf_scaffold_50_22
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26569..27588)
DNA (1020bp) protein (340aa)
Twin-arginine translocation pathway signal n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IHN1_AZOC5
twin-arginine translocation pathway signal
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:BAF89297.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_750_bf_scaffold_50_23
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27768..29201
DNA (1434bp) protein (478aa)
dihydropyrimidinase; K01464 dihydropyrimidinase [EC:3.5.2.2] rbh
Dihydropyrimidinase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIX0_PSEUX rbh
Uncharacterized protein {ECO:0000313|EMBL:ETW95970.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
SCNpilot_cont_750_bf_scaffold_50_24
unknown

Not on your lists

29198..29539
DNA (342bp) protein (114aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_50_25
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29528..30247)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RSW3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EFH09609.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_50_26
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30335..31576
DNA (1242bp) protein (414aa)
molybdenum cofactor synthesis domain-containing protein; K03750 molybdopterin molybdotransferase [EC:2.10.1.1]
molybdopterin biosynthesis protein MoeA n=1 Tax=Methylobacterium sp. MB200 RepID=UPI0003465442
Molybdenum cofactor synthesis domain protein {ECO:0000313|EMBL:ACB81121.1}; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
SCNpilot_cont_750_bf_scaffold_50_27
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31569..32441
DNA (873bp) protein (291aa)
Putative formate dehydrogenase accessory protein FdhD-like n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AJK0_AZOBR rbh
putative formate dehydrogenase accessory protein FdhD-like rbh
Protein FdhD homolog {ECO:0000256|SAAS:SAAS00093832}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
SCNpilot_cont_750_bf_scaffold_50_28
bacterium YEK0313, Bacteria

Not on your lists

comp(32550..33899)
DNA (1350bp) protein (450aa)
MmgE/PrpD family protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZK3_9BURK rbh
2-methylcitrate dehydratase {ECO:0000313|EMBL:CEJ10940.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
MmgE/PrpD family protein rbh
SCNpilot_cont_750_bf_scaffold_50_29
Bordetella holmesii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33896..34855)
DNA (960bp) protein (320aa)
hydroxymethylglutaryl-CoA lyase (EC:4.1.3.4); K01640 hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] rbh
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI00036C5CC1 rbh
HMGL-like protein {ECO:0000313|EMBL:KAK79730.1}; TaxID=1331212 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella holmesii CDC-H809-BH.;"
SCNpilot_cont_750_bf_scaffold_50_30
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34859..35650)
DNA (792bp) protein (264aa)
Enoyl CoA hydratase n=1 Tax=Nitratireductor indicus C115 RepID=K2PQ60_9RHIZ rbh
Enoyl-CoA hydratase {ECO:0000313|EMBL:GAN78132.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
fadB; enoyl CoA hydratase rbh
Displaying items 1-30 of 214 in total

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