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SCNpilot_cont_750_bf_scaffold_68

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Displaying items 1-30 of 202 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_68_1
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..206
DNA (204bp) protein (68aa)
NAD(P) transhydrogenase subunit alpha (EC:1.6.1.2); K00324 NAD(P) transhydrogenase subunit alpha [EC:1.6.1.2]
NAD(P) transhydrogenase n=3 Tax=Pandoraea RepID=V5UHV4_9BURK
NAD(P) transhydrogenase {ECO:0000313|EMBL:AHB06761.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;"
SCNpilot_cont_750_bf_scaffold_68_2
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

208..1587
DNA (1380bp) protein (460aa)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;"
NAD(P) transhydrogenase subunit beta; K00325 NAD(P) transhydrogenase subunit beta [EC:1.6.1.2] rbh
NAD(P) transhydrogenase subunit beta n=2 Tax=Pandoraea RepID=V5UJL1_9BURK rbh
SCNpilot_cont_750_bf_scaffold_68_3
Pandoraea sputorum, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1694..2644
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034D4A85 rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:AJC17759.1}; TaxID=93222 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sputorum.;"
LysR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_68_4
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2914..3672)
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003455B2B rbh
Hydratase/decarboxylase {ECO:0000313|EMBL:EON12993.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
hydratase/decarboxylase
SCNpilot_cont_750_bf_scaffold_68_5
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3895..4683
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00037DC49C rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:EON12994.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
GntR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_68_6
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4756..5430)
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000365E5D3 rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:EON12995.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
GntR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_68_7
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5494..6420
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000379C83D rbh
Enoyl-CoA hydratase {ECO:0000313|EMBL:EON12996.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
enoyl-CoA hydratase rbh
SCNpilot_cont_750_bf_scaffold_68_8
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6422..7651
DNA (1230bp) protein (410aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003466C70 rbh
Uncharacterized protein {ECO:0000313|EMBL:EON12997.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
putative formyl-coenzyme A transferase (Formyl-CoA transferase) Frc rbh
SCNpilot_cont_750_bf_scaffold_68_9
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7958..9829
DNA (1872bp) protein (624aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000370D324 rbh
Glucoamylase {ECO:0000313|EMBL:AJE99248.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
glycoside hydrolase rbh
SCNpilot_cont_750_bf_scaffold_68_10
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9942..11387
DNA (1446bp) protein (482aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034AFB40 rbh
EmrB/QacA subfamily drug resistance transporter {ECO:0000313|EMBL:AJE99250.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
major facilitator transporter rbh
SCNpilot_cont_750_bf_scaffold_68_11
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11397..12656)
DNA (1260bp) protein (420aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003474DF6 rbh
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EON13001.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein rbh
SCNpilot_cont_750_bf_scaffold_68_12
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12837..13511)
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00036B5B64 rbh
Uncharacterized protein {ECO:0000313|EMBL:AJF01068.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
hypothetical protein; K09857 hypothetical protein
SCNpilot_cont_750_bf_scaffold_68_13
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13508..15172)
DNA (1665bp) protein (555aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034C8A03 rbh
Mammalian cell entry protein {ECO:0000313|EMBL:AHB77139.1}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;"
mammalian cell entry domain-containing protein; K06192 paraquat-inducible protein B rbh
SCNpilot_cont_750_bf_scaffold_68_14
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15165..15809)
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034C1E9D rbh
Paraquat-inducible protein A {ECO:0000313|EMBL:AHB77140.1}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;"
Paraquat-inducible protein A; K03808 paraquat-inducible protein A
SCNpilot_cont_750_bf_scaffold_68_15
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15806..16477)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00037045F6 rbh
Paraquat-inducible protein A {ECO:0000313|EMBL:AIU28943.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
pqiA2; paraquat-inducible protein A; K03808 paraquat-inducible protein A
SCNpilot_cont_750_bf_scaffold_68_16
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16657..17247
DNA (591bp) protein (197aa)
Formate dehydrogenase O alpha subunit (EC:1.2.1.2)
sulfate ABC transporter substrate-binding protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000347145B rbh
Sulfate ABC transporter substrate-binding protein {ECO:0000313|EMBL:AHB77142.1}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;"
SCNpilot_cont_750_bf_scaffold_68_17
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17296..19725
DNA (2430bp) protein (810aa)
fdnG, fdoG; formate dehydrogenase, major subunit (EC:1.2.1.2); K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] rbh
formate dehydrogenase n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003454397 rbh
Formate dehydrogenase {ECO:0000313|EMBL:AIU28945.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
SCNpilot_cont_750_bf_scaffold_68_18
Pandoraea oxalativorans, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19735..20685
DNA (951bp) protein (317aa)
formate dehydrogenase-N subunit beta n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034BCE19 rbh
Formate dehydrogenase {ECO:0000313|EMBL:AKC70101.1}; TaxID=573737 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea oxalativorans.;"
formate dehydrogenase subunit beta; K00124 formate dehydrogenase, beta subunit rbh
SCNpilot_cont_750_bf_scaffold_68_19
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20688..21335
DNA (648bp) protein (216aa)
Formate dehydrogenase O gamma subunit (EC:1.2.1.2) rbh
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034CC785 rbh
Formate dehydrogenase {ECO:0000313|EMBL:KHQ93100.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
SCNpilot_cont_750_bf_scaffold_68_20
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21378..22415
DNA (1038bp) protein (346aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00036B9C3F rbh
Protein FdhE homolog {ECO:0000256|HAMAP-Rule:MF_00611}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
fdhE; formate dehydrogenase accessory protein FdhE; K02380 FdhE protein
SCNpilot_cont_750_bf_scaffold_68_21
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22434..23864
DNA (1431bp) protein (477aa)
L-seryl-tRNA(Sec) selenium transferase {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029253}; EC=2.9.1.1 {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029254};; Selenocysteine synthase {ECO:0000256|HAMAP-Rule:MF_00423}; Selenocysteinyl-tRNA(Sec) synthase {ECO:0000256|HAMAP-Rule:MF_00423}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
selA; L-seryl-tRNA selenium transferase (EC:2.9.1.1); K01042 L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] rbh
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000345979A rbh
SCNpilot_cont_750_bf_scaffold_68_22
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23861..25771
DNA (1911bp) protein (637aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000349242A rbh
Translation elongation factor {ECO:0000313|EMBL:AJE99260.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
selenocysteine-specific translation elongation factor rbh
SCNpilot_cont_750_bf_scaffold_68_23
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26158..26607)
DNA (450bp) protein (150aa)
cynS; cyanate hydratase (EC:4.2.1.104); K01725 cyanate lyase [EC:4.2.1.104]
Cyanate hydratase {ECO:0000256|HAMAP-Rule:MF_00535}; Short=Cyanase {ECO:0000256|HAMAP-Rule:MF_00535};; EC=4.2.1.104 {ECO:0000256|HAMAP-Rule:MF_00535};; Cyanate hydrolase {ECO:0000256|HAMAP-Rule:MF_00535}; Cyanate lyase {ECO:0000256|HAMAP-Rule:MF_00535}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
cyanate hydratase n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034A7E7B
SCNpilot_cont_750_bf_scaffold_68_24
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26641..27570)
DNA (930bp) protein (310aa)
ABC transporter-like protein; K15578 nitrate/nitrite transport system ATP-binding protein [EC:3.6.3.-] rbh
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000344ADEB rbh
Nitrate ABC transporter ATPase {ECO:0000313|EMBL:KER72366.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;"
SCNpilot_cont_750_bf_scaffold_68_25
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27560..28429)
DNA (870bp) protein (290aa)
nitrate ABC transporter permease n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034CE024 rbh
Nitrate ABC transporter permease {ECO:0000313|EMBL:KER72367.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;"
nitrate ABC transporter permease; K15577 nitrate/nitrite transport system permease protein rbh
SCNpilot_cont_750_bf_scaffold_68_26
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28445..29839)
DNA (1395bp) protein (465aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00037265A5 rbh
Nitrate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KER72368.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;"
ABC transporter nitrate-binding protein; K15576 nitrate/nitrite transport system substrate-binding protein rbh
SCNpilot_cont_750_bf_scaffold_68_27
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29899..31254)
DNA (1356bp) protein (452aa)
rubredoxin-type Fe(Cys)4 protein; K05297 rubredoxin-NAD+ reductase [EC:1.18.1.1] rbh
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000345564E rbh
Tax=BJP_IG2103_Rhodocyclales_63_50
SCNpilot_cont_750_bf_scaffold_68_28
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31251..32390)
DNA (1140bp) protein (380aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003482E11 rbh
acyl-CoA dehydrogenase rbh
Tax=BJP_IG2103_Rhodocyclales_63_50
SCNpilot_cont_750_bf_scaffold_68_29
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32435..32974)
DNA (540bp) protein (180aa)
peroxiredoxin n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034513F8 rbh
OsmC-like protein
Tax=BJP_IG2103_Rhodocyclales_63_50
SCNpilot_cont_750_bf_scaffold_68_30
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33193..34722)
DNA (1530bp) protein (510aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000371447E rbh
Fis family transcriptional regulator {ECO:0000313|EMBL:KER72372.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;"
NifA subfamily transcriptional regulator; K02584 Nif-specific regulatory protein rbh
Displaying items 1-30 of 202 in total

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