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SCNpilot_cont_750_bf_scaffold_286

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_286_1
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(158..1216)
DNA (1059bp) protein (353aa)
Threonine-phosphate decarboxylase {ECO:0000313|EMBL:EON14153.1}; EC=4.1.1.81 {ECO:0000313|EMBL:EON14153.1};; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
Threonine-phosphate decarboxylase n=1 Tax=Pandoraea sp. SD6-2 RepID=R7X3T5_9BURK rbh
L-threonine-O-3-phosphate decarboxylase; K02225 cobalamin biosynthetic protein CobC rbh
SCNpilot_cont_750_bf_scaffold_286_2
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1213..2193)
DNA (981bp) protein (327aa)
cbiB; cobalamin biosynthesis protein CbiB (EC:6.3.1.10); K02227 adenosylcobinamide-phosphate synthase [EC:6.3.1.10] rbh
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000349513A rbh
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024, ECO:0000313|EMBL:AJF00572.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
SCNpilot_cont_750_bf_scaffold_286_3
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2200..2751)
DNA (552bp) protein (184aa)
Adenosylcobinamide-phosphate guanylyltransferase (EC:2.7.7.62); K02231 adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000347DF61 rbh
Adenosylcobinamide kinase {ECO:0000313|EMBL:AJF00571.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
SCNpilot_cont_750_bf_scaffold_286_4
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2792..4348
DNA (1557bp) protein (519aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034AA09B rbh
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
Cobyric acid synthase
SCNpilot_cont_750_bf_scaffold_286_5
Pandoraea oxalativorans, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4409..5032
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000348D7D9 rbh
Cobyrinic acid a,c-diamide synthase {ECO:0000313|EMBL:AKC69885.1}; TaxID=573737 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea oxalativorans.;"
chromosome partitioning-related ATPase; K03496 chromosome partitioning protein rbh
SCNpilot_cont_750_bf_scaffold_286_6
Pandoraea sputorum, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5134..5556)
DNA (423bp) protein (141aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=93222 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sputorum.;"
aspartate 1-decarboxylase; K01579 aspartate 1-decarboxylase [EC:4.1.1.11]
aspartate decarboxylase n=1 Tax=Pandoraea sp. B-6 RepID=UPI000349EA68
SCNpilot_cont_750_bf_scaffold_286_7
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5684..6520)
DNA (837bp) protein (279aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247609}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247611};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247610}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD
panC; pantoate--beta-alanine ligase (EC:6.3.2.1); K01918 pantoate--beta-alanine ligase [EC:6.3.2.1] rbh
pantoate--beta-alanine ligase n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034A6ACA rbh
SCNpilot_cont_750_bf_scaffold_286_8
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6705..7727)
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003471115 rbh
Segregation and condensation protein A {ECO:0000256|SAAS:SAAS00093938}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
Segregation and condensation protein ScpA; K05896 segregation and condensation protein A rbh
SCNpilot_cont_750_bf_scaffold_286_9
Pandoraea vervacti, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7755..7937)
DNA (183bp) protein (61aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034D27CE
Uncharacterized protein {ECO:0000313|EMBL:AJP56734.1}; TaxID=656178 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea vervacti.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_286_10
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8292..10022
DNA (1731bp) protein (577aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00037B8CE1 rbh
Membrane protein {ECO:0000313|EMBL:AJF01336.2}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_286_11
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10022..14167
DNA (4146bp) protein (1382aa)
Signal peptide protein n=1 Tax=Pandoraea sp. SD6-2 RepID=R7X3S4_9BURK rbh
Signal peptide protein {ECO:0000313|EMBL:EON14143.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
hypothetical protein; K09800 hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_286_12
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14302..14838
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003805BD6 rbh
Lipoprotein {ECO:0000313|EMBL:KHQ99295.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
putative lipoprotein
SCNpilot_cont_750_bf_scaffold_286_13
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14886..15149)
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034D76CC
Type 1 capsular polysaccharide biosynthesis protein J {ECO:0000313|EMBL:EON14141.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
type 1 capsular polysaccharide biosynthesis protein J
SCNpilot_cont_750_bf_scaffold_286_14
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15267..15728
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00037218E5 rbh
Transcriptional regulator {ECO:0000313|EMBL:AJF01334.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
putative AsnC family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_286_15
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15896..17995)
DNA (2100bp) protein (700aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
metG; methionyl-tRNA synthetase; K01874 methionyl-tRNA synthetase [EC:6.1.1.10] rbh
methionyl-tRNA synthetase n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034DA5BB rbh
SCNpilot_cont_750_bf_scaffold_286_16
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18457..19101)
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000344AE28 rbh
Outer membrane protein peptidoglycan-associated(Lipo)protein {ECO:0000313|EMBL:EON14138.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
outer membrane lipoprotein
SCNpilot_cont_750_bf_scaffold_286_17
Pandoraea sputorum, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19377..20459
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003483D5C rbh
ATP-binding protein {ECO:0000313|EMBL:AJC17924.1}; TaxID=93222 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sputorum.;"
hypothetical protein; K03593 ATP-binding protein involved in chromosome partitioning rbh
SCNpilot_cont_750_bf_scaffold_286_18
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20583..21152
DNA (570bp) protein (190aa)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13); K01494 dCTP deaminase [EC:3.5.4.13] rbh
Deoxycytidine triphosphate deaminase n=1 Tax=Pandoraea sp. SD6-2 RepID=R7X3M5_9BURK rbh
SCNpilot_cont_750_bf_scaffold_286_19
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21258..23543
DNA (2286bp) protein (762aa)
lysine decarboxylase (EC:4.1.1.18); K01584 arginine decarboxylase [EC:4.1.1.19] rbh
lysine decarboxylase n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034B403E rbh
Lysine decarboxylase {ECO:0000313|EMBL:AHB06936.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;"
SCNpilot_cont_750_bf_scaffold_286_20
unknown

Not on your lists

23911..24072
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_286_21
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24260..25162)
DNA (903bp) protein (301aa)
LysR substrate binding domain protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XCX0_9BURK rbh
LysR family transcriptional regulator rbh
LysR substrate binding domain protein {ECO:0000313|EMBL:EFF75346.1}; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii ATCC 43553.;"
SCNpilot_cont_750_bf_scaffold_286_22
Burkholderia ambifaria, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25321..25881
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) RepID=Q0BE76_BURCM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABI87547.1}; TaxID=339670 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia; cepacia (strain AMMD)).;"
SCNpilot_cont_750_bf_scaffold_286_23
Azotobacter chroococcum, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25874..26200
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) RepID=Q0BE75_BURCM
Plasmid pAcX50f, complete sequence {ECO:0000313|EMBL:AJE23954.1}; TaxID=1328314 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter chroococcum NCIMB 8003.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_286_24
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26222..27061
DNA (840bp) protein (280aa)
Metallo-beta-lactamase domain protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XCW8_9BURK rbh
beta-lactamase domain-containing protein rbh
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EFF75344.1}; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii ATCC 43553.;"
SCNpilot_cont_750_bf_scaffold_286_25
Zymomonas mobilis, Zymomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27110..27448
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) RepID=Q5NL43_ZYMMO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV90567.2}; TaxID=264203 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Zymomonas.;" source="Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4).;"
SCNpilot_cont_750_bf_scaffold_286_26
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27837..28499
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LN24_RALME
hypothetical protein; K09965 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF08452.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
SCNpilot_cont_750_bf_scaffold_286_27
Paenibacillus sp. IHBB 10380, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28496..28933
DNA (438bp) protein (146aa)
Putative uncharacterized protein n=1 Tax=Paenibacillus sp. Aloe-11 RepID=H6CDT5_9BACL
Uncharacterized protein {ECO:0000313|EMBL:AJS58487.1}; TaxID=1566358 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. IHBB 10380.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_286_28
Asticcacaulis sp. AC466, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28939..29853
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC466 RepID=V4NJ46_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ81862.1}; TaxID=1282362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC466.;"
alpha/beta hydrolase fold protein
SCNpilot_cont_750_bf_scaffold_286_29
Herbaspirillum seropedicae, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30051..30875
DNA (825bp) protein (275aa)
oxacillin hydrolase (class-D beta-lactamase) signal peptide protein (EC:3.5.2.6); K01467 beta-lactamase [EC:3.5.2.6] rbh
Beta-lactamase {ECO:0000256|RuleBase:RU361140}; EC=3.5.2.6 {ECO:0000256|RuleBase:RU361140};; TaxID=757424 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum seropedicae (strain SmR1).;"
Oxacillin hydrolase (Class-D beta-lactamase) signal peptide protein n=1 Tax=Herbaspirillum seropedicae (strain SmR1) RepID=D8IQF9_HERSS rbh
SCNpilot_cont_750_bf_scaffold_286_30
Herbaspirillum seropedicae, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30905..32026
DNA (1122bp) protein (374aa)
acetyltransferase (EC:2.3.1.-) rbh
Acetyltransferase protein {ECO:0000313|EMBL:ADJ65070.1}; EC=2.3.1.- {ECO:0000313|EMBL:ADJ65070.1};; TaxID=757424 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum seropedicae (strain SmR1).;"
Acetyltransferase protein n=1 Tax=Herbaspirillum seropedicae (strain SmR1) RepID=D8IQF8_HERSS rbh
Displaying items 1-30 of 65 in total

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