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SCNpilot_cont_750_bf_scaffold_2405

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_2405_1
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..144)
DNA (144bp) protein (48aa)
3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoAhydratase {ECO:0000313|EMBL:ABS62113.1}; EC=4.2.1.107 {ECO:0000313|EMBL:ABS62113.1};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoAhydratase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQD0_PARL1
3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase
SCNpilot_cont_750_bf_scaffold_2405_2
unknown

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262..744
DNA (483bp) protein (161aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_2405_3
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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772..2145
DNA (1374bp) protein (458aa)
peptide transporter n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B558BB rbh
amino acid/peptide transporter; K03305 proton-dependent oligopeptide transporter, POT family rbh
Amino acid/peptide transporter {ECO:0000313|EMBL:ACG78220.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCNpilot_cont_750_bf_scaffold_2405_4
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2142..3962)
DNA (1821bp) protein (607aa)
cyclic nucleotide-binding protein n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003A76665 rbh
Uncharacterized protein {ECO:0000313|EMBL:AIF46397.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
cyclic nucleotide-binding protein rbh
SCNpilot_cont_750_bf_scaffold_2405_5
Knoellia subterranea, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3988..4767)
DNA (780bp) protein (260aa)
short-chain dehydrogenase n=1 Tax=Perlucidibaca piscinae RepID=UPI0003B64394
Uncharacterized protein {ECO:0000313|EMBL:KGN36914.1}; TaxID=1385521 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia subterranea KCTC 19937.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_750_bf_scaffold_2405_6
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4991..6232
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DQU2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU81102.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
SCNpilot_cont_750_bf_scaffold_2405_7
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6323..6880
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S6W4_9BURK
Membrane protein {ECO:0000313|EMBL:KDP86732.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_2405_8
unknown

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comp(7481..7768)
DNA (288bp) protein (96aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_2405_9
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8053..8754
DNA (702bp) protein (234aa)
SCP-like extracellular n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQA0_PARL1
hypothetical protein
SCP-like extracellular {ECO:0000313|EMBL:ABS62083.1}; Flags: Precursor;; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_750_bf_scaffold_2405_10
unknown

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9065..9931
DNA (867bp) protein (289aa)

This feature has no annotations

Displaying 10 items

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