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SCNpilot_cont_750_bf_scaffold_2889

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_2889_1
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..1055
DNA (1053bp) protein (351aa)
Glycoside hydrolase 15-related protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SN66_NITWN
glycoside hydrolase 15-related
Glycoside hydrolase 15-related protein {ECO:0000313|EMBL:ABA06275.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_750_bf_scaffold_2889_2
Pseudomonas sp. M1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1037..2371
DNA (1335bp) protein (445aa)
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) {ECO:0000256|RuleBase:RU362045}; EC=2.4.1.15 {ECO:0000256|RuleBase:RU362045};; Osmoregulatory trehalose synthesis protein A {ECO:0000256|RuleBase:RU362045}; Trehalose-6-phosphate synthase {ECO:0000256|RuleBase:RU362045}; TaxID=95619 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain M1).;"
otsA; protein OtsA; K00697 trehalose 6-phosphate synthase [EC:2.4.1.15]
Alpha,alpha-trehalose-phosphate synthase n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HPR0_PSEUO
SCNpilot_cont_750_bf_scaffold_2889_3
unknown

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comp(2382..2729)
DNA (348bp) protein (116aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_2889_4
Lyngbya sp. PCC 8106, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(2740..3114)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Lyngbya sp. (strain PCC 8106) RepID=A0YP63_LYNSP
Uncharacterized protein {ECO:0000313|EMBL:EAW37285.1}; TaxID=313612 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya sp. (strain PCC 8106) (Lyngbya aestuarii (strain CCY9616)).;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_2889_5
Ochrobactrum sp. EGD-AQ16, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3179..3943
DNA (765bp) protein (255aa)
Alpha/beta hydrolase n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1X318_9RHIZ
Alpha/beta hydrolase {ECO:0000313|EMBL:ERI15204.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
alpha/beta hydrolase fold protein
SCNpilot_cont_750_bf_scaffold_2889_6
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4259..4936
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Loktanella hongkongensis RepID=UPI0003789C22
CarD family transcriptional regulator {ECO:0000313|EMBL:KFG66501.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_2889_7
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4984..7437
DNA (2454bp) protein (818aa)
DEAD/DEAH box helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-]
DEAD/H associated domain protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQ93_PARL1
DEAD/H associated domain protein {ECO:0000313|EMBL:ABS62076.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_750_bf_scaffold_2889_8
Methylobacterium radiotolerans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7418..8128
DNA (711bp) protein (237aa)
Metallophosphoesterase n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1LVA4_METRJ
metallophosphoesterase; K06953
Metallophosphoesterase {ECO:0000313|EMBL:ACB22549.1}; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;"
SCNpilot_cont_750_bf_scaffold_2889_9
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8125..8796)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LSD0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KGM32851.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_2889_10
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8793..9710)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8RXM5_9RHOB
Membrane protein, putative {ECO:0000313|EMBL:CDO60167.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
hypothetical protein; K07090
SCNpilot_cont_750_bf_scaffold_2889_11
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9835..11097)
DNA (1263bp) protein (421aa)
Putative peptidoglycan binding protein,Sel1 repeat protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0CRT3_RHILT
Putative peptidoglycan binding protein,Sel1 repeat protein {ECO:0000313|EMBL:EJC82455.1}; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2297.;"
peptidoglycan-binding protein; K13582 localization factor PodJL
Displaying 11 items

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