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SCNpilot_cont_750_bf_scaffold_5687

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_5687_1
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..304
DNA (303bp) protein (101aa)
Competence protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QMI5_9BRAD
Competence protein {ECO:0000313|EMBL:EGP07550.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
SCNpilot_cont_750_bf_scaffold_5687_2
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(344..1081)
DNA (738bp) protein (246aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008054};; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
lexA; LexA repressor; K01356 repressor LexA [EC:3.4.21.88]
LexA repressor n=2 Tax=Rhizobium/Agrobacterium group RepID=LEXA_AGRRK
SCNpilot_cont_750_bf_scaffold_5687_3
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1255..1521
DNA (267bp) protein (89aa)
Putative transmembrane protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JIE2_HYPSM
transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:CCB65749.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_cont_750_bf_scaffold_5687_4
unknown

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comp(1570..1971)
DNA (402bp) protein (134aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_5687_5
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1971..2771)
DNA (801bp) protein (267aa)
indole-3-glycerol phosphate synthase; K01609 indole-3-glycerol phosphate synthase [EC:4.1.1.48]
Indole-3-glycerol phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00134}; Short=IGPS {ECO:0000255|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000255|HAMAP-Rule:MF_00134};; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
Indole-3-glycerol phosphate synthase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=TRPC_MESSB
SCNpilot_cont_750_bf_scaffold_5687_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2768..3769)
DNA (1002bp) protein (334aa)
anthranilate phosphoribosyltransferase (EC:2.4.2.18); K00766 anthranilate phosphoribosyltransferase [EC:2.4.2.18]
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI000360C787
SCNpilot_cont_750_bf_scaffold_5687_7
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3766..4368)
DNA (603bp) protein (201aa)
Anthranilate synthase, amidotransferase component @ Para-aminobenzoate synthase, amidotransferase component # TrpAb@PabAb {ECO:0000313|EMBL:CDO61019.1}; EC=2.6.1.85 {ECO:0000313|EMBL:CDO61019.1};; EC=4.1.3.27 {ECO:0000313|EMBL:CDO61019.1};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
glutamine amidotransferase; K01658 anthranilate synthase component II [EC:4.1.3.27]
Glutamine amidotransferase of anthranilate synthase n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JXB9_HYPDA
SCNpilot_cont_750_bf_scaffold_5687_8
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4703..5545)
DNA (843bp) protein (281aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XGE2_9CHRO
Uncharacterized protein {ECO:0000313|EMBL:AHE53618.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
transcriptional regulator, Crp/Fnr family
SCNpilot_cont_750_bf_scaffold_5687_9
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5761..6417
DNA (657bp) protein (219aa)
Dentin sialophosphoprotein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVP4_BREDI
Dentin sialophosphoprotein {ECO:0000313|EMBL:EGF96673.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
putative histidine secretory acid phosphatase
SCNpilot_cont_750_bf_scaffold_5687_10
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6482..6838
DNA (357bp) protein (119aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVP3_BREDI
Putative uncharacterized protein {ECO:0000313|EMBL:EGF96672.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_5687_11
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6840..7568
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RGJ1_PHEZH
hypothetical protein; K06992
Uncharacterized protein {ECO:0000313|EMBL:ACG78897.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCNpilot_cont_750_bf_scaffold_5687_12
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7565..8581
DNA (1017bp) protein (339aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVP1_BREDI
Putative uncharacterized protein {ECO:0000313|EMBL:EGF96670.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_750_bf_scaffold_5687_13
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8628..9665)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RGJ0_PHEZH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG78896.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
Displaying 13 items

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