ggKbase home page

SCNpilot_cont_750_p_scaffold_1057

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_1057_1
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..489
DNA (489bp) protein (163aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HS87_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK56416.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_1057_2
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

679..984
DNA (306bp) protein (102aa)
ATP-dependent Clp protease adapter protein ClpS 2 n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=CLPS2_RHILO
clpS; ATP-dependent Clp protease adaptor
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
SCNpilot_cont_750_p_scaffold_1057_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(997..1365)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000370BA8F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACF00620.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
SCNpilot_cont_750_p_scaffold_1057_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1964..2737)
DNA (774bp) protein (258aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VEQ1_RHOPX
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADU45195.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
SCNpilot_cont_750_p_scaffold_1057_5
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2982..4046)
DNA (1065bp) protein (355aa)
putative haloacid dehydrogenase; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95]
Phosphoglycerate dehydrogenase-like oxidoreductase n=2 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0VID5_RHILT
Phosphoglycerate dehydrogenase-like oxidoreductase {ECO:0000313|EMBL:EJC72523.1}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
SCNpilot_cont_750_p_scaffold_1057_6
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4202..5257
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F4P5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV11440.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein rbh
SCNpilot_cont_750_p_scaffold_1057_7
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5499..6671
DNA (1173bp) protein (391aa)
Oxidoreductase domain-containing protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HKL1_9RHIZ
Oxidoreductase domain-containing protein {ECO:0000313|EMBL:EHK58709.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
oxidoreductase domain-containing protein
SCNpilot_cont_750_p_scaffold_1057_8
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6626..7057
DNA (432bp) protein (144aa)
Putative uncharacterized protein n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13KK2_BURXL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE35387.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
SCNpilot_cont_750_p_scaffold_1057_9
unknown

Not on your lists

comp(7103..7300)
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_1057_10
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7375..8790)
DNA (1416bp) protein (472aa)
alpha,alpha-trehalose-phosphate synthase (UDP-forming); K00697 trehalose 6-phosphate synthase [EC:2.4.1.15]
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) {ECO:0000256|RuleBase:RU362045}; EC=2.4.1.15 {ECO:0000256|RuleBase:RU362045, ECO:0000313|EMBL:ABG62923.1};; Osmoregulatory trehalose synthesis protein A {ECO:0000256|RuleBase:RU362045}; Trehalose-6-phosphate synthase {ECO:0000256|RuleBase:RU362045}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
Trehalose 6-phosphate synthase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11I52_MESSB
SCNpilot_cont_750_p_scaffold_1057_11
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8808..9623)
DNA (816bp) protein (272aa)
HAD family hydrolase; K01087 trehalose 6-phosphate phosphatase [EC:3.1.3.12]
Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117}; EC=3.1.3.12 {ECO:0000256|RuleBase:RU361117, ECO:0000313|EMBL:ABG62925.1};; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
Trehalose 6-phosphatase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11I50_MESSB
SCNpilot_cont_750_p_scaffold_1057_12
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9749..10294)
DNA (546bp) protein (182aa)
shikimate kinase n=1 Tax=Rhizobium meliloti RepID=UPI000367D42A
Adenylate kinase and related kinase
Uncharacterized protein {ECO:0000313|EMBL:AEH79806.1}; TaxID=707241 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain SM11).;"
SCNpilot_cont_750_p_scaffold_1057_13
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10515..10967
DNA (453bp) protein (151aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HMI9_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK58047.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
fucose dissimilation pathway protein FucU
SCNpilot_cont_750_p_scaffold_1057_14
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10975..11910
DNA (936bp) protein (312aa)
hypothetical protein; K00852 ribokinase [EC:2.7.1.15] rbh
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037BD8AB
Ribokinase {ECO:0000313|EMBL:KJC57071.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
SCNpilot_cont_750_p_scaffold_1057_15
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12103..13788
DNA (1686bp) protein (562aa)
UPI0003CF2B53 related cluster n=1 Tax=unknown RepID=UPI0003CF2B53
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESW92727.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
family 1 extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein
SCNpilot_cont_750_p_scaffold_1057_16
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13889..15004
DNA (1116bp) protein (372aa)
ABC transporter membrane spanning protein (Sugar) n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K573_AGRVS
Sugar ABC transporter permease {ECO:0000313|EMBL:KGM32189.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
sugar ABC transporter permease; K02025 multiple sugar transport system permease protein
SCNpilot_cont_750_p_scaffold_1057_17
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15013..15948
DNA (936bp) protein (312aa)
UPI0003CF85CB related cluster n=1 Tax=unknown RepID=UPI0003CF85CB
Sugar ABC transporter permease {ECO:0000313|EMBL:ESW92725.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
binding-protein-dependent transport systems inner membrane component; K02026 multiple sugar transport system permease protein
SCNpilot_cont_750_p_scaffold_1057_18
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15981..16535)
DNA (555bp) protein (185aa)
6-phospho 3-hexuloisomerase; K08094 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI000382D3F1
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
SCNpilot_cont_750_p_scaffold_1057_19
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16700..17767
DNA (1068bp) protein (356aa)
Dipeptidase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TJK4_9PROT
Peptidase {ECO:0000313|EMBL:KFG67400.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
Zn-dependent dipeptidase, microsomal dipeptidase
SCNpilot_cont_750_p_scaffold_1057_20
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18010..20352
DNA (2343bp) protein (781aa)
UPI0003CFC0B2 related cluster n=1 Tax=unknown RepID=UPI0003CFC0B2
Copper-transporting P-type ATPase {ECO:0000313|EMBL:ESZ20139.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
heavy metal translocating P-type ATPase
SCNpilot_cont_750_p_scaffold_1057_21
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20796..21587
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YER1_MOBAS
Uncharacterized protein {ECO:0000313|EMBL:EAS48834.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_1057_22
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21620..22363)
DNA (744bp) protein (248aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
Short-chain dehydrogenase/reductase SDR n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W6B5_DYAFD
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACT94255.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_cont_750_p_scaffold_1057_23
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22493..22753)
DNA (261bp) protein (87aa)
Cell division topological specificity factor n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y7N2_9RHIZ
minE; cell division topological specificity factor MinE; K03608 cell division topological specificity factor
Cell division topological specificity factor {ECO:0000256|HAMAP-Rule:MF_00262, ECO:0000256|SAAS:SAAS00085645}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
SCNpilot_cont_750_p_scaffold_1057_24
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22750..23565)
DNA (816bp) protein (272aa)
UPI0003D02BC4 related cluster n=1 Tax=unknown RepID=UPI0003D02BC4
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
cell division inhibitor MinD; K03609 septum site-determining protein MinD
SCNpilot_cont_750_p_scaffold_1057_25
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23600..24379)
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002D4F3F8
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
septum site-determining protein MinC; K03610 septum site-determining protein MinC
SCNpilot_cont_750_p_scaffold_1057_26
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24685..25635
DNA (951bp) protein (317aa)
Sugar (D-ribose) ABC transporter, periplasmic sugar-binding protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EGZ7_9RHIZ
Sugar (D-ribose) ABC transporter, periplasmic sugar-binding protein {ECO:0000313|EMBL:CCV03854.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
sugar ABC transporter substrate-binding protein; K10439 ribose transport system substrate-binding protein
SCNpilot_cont_750_p_scaffold_1057_27
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25712..27232
DNA (1521bp) protein (507aa)
sugar (D-ribose) ABC transporter ATP-binding protein (EC:3.6.3.17); K10441 ribose transport system ATP-binding protein [EC:3.6.3.17]
ABC transporter, ATP-binding protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZVL4_9PROT
D-ribose transporter ATP-binding protein {ECO:0000313|EMBL:KJC62581.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
SCNpilot_cont_750_p_scaffold_1057_28
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27243..28247
DNA (1005bp) protein (335aa)
UPI0003CE773D related cluster n=1 Tax=unknown RepID=UPI0003CE773D
Sugar ABC transporter permease {ECO:0000313|EMBL:KDR38572.1}; Xylose ABC transporter, permease protein XylH {ECO:0000313|EMBL:CDY78850.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
inner-membrane translocator; K10440 ribose transport system permease protein
SCNpilot_cont_750_p_scaffold_1057_29
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28278..29060
DNA (783bp) protein (261aa)
Transcriptional regulator n=1 Tax=Microvirga sp. WSM3557 RepID=I4YUW3_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:EIM27755.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
GntR family transcriptional regulator
SCNpilot_cont_750_p_scaffold_1057_30
Hoeflea phototrophica, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29082..30014)
DNA (933bp) protein (311aa)
Putative dehydrogenase {ECO:0000313|EMBL:EDQ33649.1}; EC=1.1.1.48 {ECO:0000313|EMBL:EDQ33649.1};; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrophica DFL-43.;"
galactose 1-dehydrogenase; K00035 D-galactose 1-dehydrogenase [EC:1.1.1.48]
Putative GFO/IDH/MocA family oxidoreductase n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D736_9RHIZ
Displaying items 1-30 of 33 in total

View Taxonomy