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SCNpilot_cont_750_p_scaffold_1162

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_1162_1
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..2927)
DNA (2925bp) protein (975aa)
Hydrophobe/amphiphile efflux-1 (HAE1) family protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UFL2_RHIRD
Transporter {ECO:0000313|EMBL:EXL02268.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
hydrophobe/amphiphile efflux-1 (HAE1) family protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family rbh
SCNpilot_cont_750_p_scaffold_1162_2
Ochrobactrum sp. EGD-AQ16, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2924..4171)
DNA (1248bp) protein (416aa)
Transporter n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1X0R6_9RHIZ
Transporter {ECO:0000313|EMBL:ERI14404.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
RND family efflux transporter MFP subunit rbh
SCNpilot_cont_750_p_scaffold_1162_3
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4455..7220)
DNA (2766bp) protein (922aa)
heavy metal translocating P-type ATPase; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5] rbh
Heavy metal translocating P-type ATPase n=3 Tax=Proteobacteria RepID=B7V4Z9_PSEA8
ATPase {ECO:0000313|EMBL:EXL02266.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
SCNpilot_cont_750_p_scaffold_1162_4
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7375..7785)
DNA (411bp) protein (137aa)
Transcriptional regulator, ArsR family (Modular protein) n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FBV9_9RHIZ
Transcriptional regulator, ArsR family (Modular protein) {ECO:0000313|EMBL:CCV13920.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
regulatory protein ArsR
SCNpilot_cont_750_p_scaffold_1162_5
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8048..8311
DNA (264bp) protein (88aa)
Glutaredoxin n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X6A1_OCHA4
glutaredoxin
Glutaredoxin {ECO:0000313|EMBL:ABS16755.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
SCNpilot_cont_750_p_scaffold_1162_6
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8323..9342
DNA (1020bp) protein (340aa)
Oxidoreductase FAD/NAD(P)-binding subunit n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UFK6_RHIRD
Oxidoreductase {ECO:0000313|EMBL:EXL02263.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
ndoR; oxidoreductase FAD-binding subunit rbh
SCNpilot_cont_750_p_scaffold_1162_7
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9407..9916)
DNA (510bp) protein (170aa)
Uncharacterized protein n=2 Tax=Labrenzia RepID=U7GNJ1_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:AJE48495.1}; TaxID=1208324 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter indicus.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_1162_8
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9982..11457)
DNA (1476bp) protein (492aa)
Multicopper oxidase type 2 n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UFK5_RHIRD
Multicopper oxidase type 2 {ECO:0000313|EMBL:EGP54510.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
multicopper oxidase type 2
SCNpilot_cont_750_p_scaffold_1162_9
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11585..11977)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UFK4_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:EYR82886.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_1162_10
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11992..12186)
DNA (195bp) protein (65aa)
Heavy metal transport/detoxification protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UFK3_RHIRD
Heavy metal transport/detoxification protein {ECO:0000313|EMBL:EGP54508.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
heavy metal transport/detoxification protein; K07213 copper chaperone
SCNpilot_cont_750_p_scaffold_1162_11
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12347..15088
DNA (2742bp) protein (914aa)
Heavy metal translocating P-type ATPase n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UFK2_RHIRD
ATPase {ECO:0000313|EMBL:EXL02259.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
heavy metal translocating p-type ATPase
SCNpilot_cont_750_p_scaffold_1162_12
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15147..15596
DNA (450bp) protein (150aa)
transcriptional regulator n=1 Tax=Kaistia granuli RepID=UPI000372DA43
Transcriptional regulator {ECO:0000313|EMBL:EXL02258.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
MerR family transcriptional regulator
SCNpilot_cont_750_p_scaffold_1162_13
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15643..16971)
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AE20_9PROT
Uncharacterized protein {ECO:0000313|EMBL:BAO30271.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
hypothetical protein rbh
SCNpilot_cont_750_p_scaffold_1162_14
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16974..18158)
DNA (1185bp) protein (395aa)
Major facilitator transporter n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UFK0_RHIRD
MFS transporter {ECO:0000313|EMBL:EXL02257.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
major facilitator superfamily protein rbh
SCNpilot_cont_750_p_scaffold_1162_15
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18261..18536
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UFJ9_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:EGP54504.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_1162_16
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18588..19310
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UFJ8_RHIRD
Membrane protein {ECO:0000313|EMBL:EXL02255.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
hypothetical protein rbh
SCNpilot_cont_750_p_scaffold_1162_17
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19333..19833
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=alpha proteobacterium L41A RepID=UPI00037467EF
Uncharacterized protein {ECO:0000313|EMBL:EXL02254.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_1162_18
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19873..21189)
DNA (1317bp) protein (439aa)
major facilitator transporter n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI000363318F
Permease,MFS rbh
Permease, MFS {ECO:0000313|EMBL:AAK65554.1}; TaxID=266834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium; meliloti).;"
SCNpilot_cont_750_p_scaffold_1162_19
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21201..21482)
DNA (282bp) protein (94aa)
UPI0003CE59A7 related cluster n=1 Tax=unknown RepID=UPI0003CE59A7
Nickel-resistant pritein NirB {ECO:0000313|EMBL:ESY73943.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
hypothetical protein; K07807 hypothetical protein NreA
SCNpilot_cont_750_p_scaffold_1162_20
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21584..22063)
DNA (480bp) protein (160aa)
Cytochrome B561 n=1 Tax=Nitratireductor indicus C115 RepID=K2PGQ6_9RHIZ
Membrane protein {ECO:0000313|EMBL:EZQ14946.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
transmembrane cytochrome b562
SCNpilot_cont_750_p_scaffold_1162_21
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22156..23091)
DNA (936bp) protein (312aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QF14_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP10354.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein rbh
SCNpilot_cont_750_p_scaffold_1162_22
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23088..23588)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MK1_MESSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG61368.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_750_p_scaffold_1162_23
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23585..24214)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MK0_MESSB
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABG61369.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_750_p_scaffold_1162_24
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24211..24423)
DNA (213bp) protein (71aa)
CopG-like DNA-binding protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QF11_9BRAD
CopG-like DNA-binding protein {ECO:0000313|EMBL:EGP10351.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
transcriptional regulator
SCNpilot_cont_750_p_scaffold_1162_25
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24574..25539
DNA (966bp) protein (322aa)
DNA polymerase, beta-like region n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MJ8_MESSB
DNA polymerase, beta-like region
DNA polymerase, beta-like region {ECO:0000313|EMBL:ABG61371.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_750_p_scaffold_1162_26
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25547..26062
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFC1_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE65076.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_p_scaffold_1162_27
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26062..27009
DNA (948bp) protein (316aa)
AAA ATPase, central region n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MJ6_MESSB
ATPase {ECO:0000313|EMBL:ETR77543.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
AAA ATPase, central region
SCNpilot_cont_750_p_scaffold_1162_28
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27019..28566
DNA (1548bp) protein (516aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QF07_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP10347.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_1162_29
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28581..29699)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8B918_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:EMS95915.1}; TaxID=1281779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens str. Cherry 2E-2-2.;"
hypothetical protein rbh
SCNpilot_cont_750_p_scaffold_1162_30
Rhizobium nepotum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29982..30926
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UH84_RHIRD
DNA invertase {ECO:0000313|EMBL:KJF65407.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;"
Resolvase, N terminal domain family rbh
Displaying 30 items

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