ggKbase home page

SCNpilot_cont_750_p_scaffold_1298

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_1298_1
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(352..3009)
DNA (2658bp) protein (886aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QRF1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF57607.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_1298_2
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3019..4392)
DNA (1374bp) protein (458aa)
Tetratricopeptide TPR_2 n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2P9M6_9RHIZ
Tetratricopeptide TPR_2 {ECO:0000313|EMBL:EKF57608.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_1298_3
Nostoc sp. PCC 7524, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

5264..6091
DNA (828bp) protein (276aa)
Putative O-linked N-acetylglucosamine transferase, SPINDLY family n=1 Tax=Nostoc sp. (strain ATCC 29411 / PCC 7524) RepID=K9R0S3_NOSS7
putative O-linked N-acetylglucosamine transferase, SPINDLY family
Putative O-linked N-acetylglucosamine transferase, SPINDLY family {ECO:0000313|EMBL:AFY50919.1}; TaxID=28072 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain ATCC 29411 / PCC 7524).;"
SCNpilot_cont_750_p_scaffold_1298_4
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6271..7107
DNA (837bp) protein (279aa)
Methyltransferase domain family protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RVP0_9GAMM
Methyltransferase domain family protein {ECO:0000313|EMBL:EEB79512.1}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC2148.;"
chromosome segregation ATPases-like
SCNpilot_cont_750_p_scaffold_1298_5
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7872..9908
DNA (2037bp) protein (679aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI0003733756
Acyltransferase {ECO:0000313|EMBL:AHY43812.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
O-antigen acetylase
SCNpilot_cont_750_p_scaffold_1298_6
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9938..11347)
DNA (1410bp) protein (470aa)
fumarate reductase/succinate dehydrogenase flavoprotein-like protein; K00244 fumarate reductase flavoprotein subunit [EC:1.3.99.1] rbh
Fumarate reductase/succinate dehydrogenase flavoprotein-like protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J4J5_POLGS
Fumarate reductase/succinate dehydrogenase flavoprotein-like protein {ECO:0000313|EMBL:ADZ72247.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_750_p_scaffold_1298_7
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11349..11966)
DNA (618bp) protein (206aa)
Isochorismatase family protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J4J6_POLGS
isochorismatase rbh
Isochorismatase family protein {ECO:0000313|EMBL:ADZ72248.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_750_p_scaffold_1298_8
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11966..14023)
DNA (2058bp) protein (686aa)
5-oxoprolinase; K01473 N-methylhydantoinase A [EC:3.5.2.14] rbh
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J4J7_POLGS
5-oxoprolinase (ATP-hydrolyzing) {ECO:0000313|EMBL:ADZ72249.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_750_p_scaffold_1298_9
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14020..15756)
DNA (1737bp) protein (579aa)
5-oxoprolinase; K01474 N-methylhydantoinase B [EC:3.5.2.14] rbh
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J4J8_POLGS
5-oxoprolinase (ATP-hydrolyzing) {ECO:0000313|EMBL:ADZ72251.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_750_p_scaffold_1298_10
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15756..16622)
DNA (867bp) protein (289aa)
Isocitrate lyase family protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J4J9_POLGS
Isocitrate lyase rbh
Isocitrate lyase family protein {ECO:0000313|EMBL:ADZ72250.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_750_p_scaffold_1298_11
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16625..17122)
DNA (498bp) protein (166aa)
leuD; 3-isopropylmalate dehydratase small subunit; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
3-isopropylmalate dehydratase small subunit n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J4K0_POLGS
SCNpilot_cont_750_p_scaffold_1298_12
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17119..18399)
DNA (1281bp) protein (427aa)
3-isopropylmalate dehydratase large subunit; K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] rbh
3-isopropylmalate dehydratase, large subunit n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J4K1_POLGS
3-isopropylmalate dehydratase, large subunit {ECO:0000313|EMBL:ADZ72253.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_750_p_scaffold_1298_13
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18396..19100)
DNA (705bp) protein (235aa)
ABC-type branched-chain amino acid transport systems, ATPase component n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J4K2_POLGS
branched-chain amino acid ABC transporter ATPase; K01996 branched-chain amino acid transport system ATP-binding protein rbh
ABC-type branched-chain amino acid transport systems, ATPase component {ECO:0000313|EMBL:ADZ72254.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_750_p_scaffold_1298_14
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19093..19839)
DNA (747bp) protein (249aa)
ABC-type transporter, ATPase component: HAAT family n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J4K3_POLGS
ABC transporter ATPase; K01995 branched-chain amino acid transport system ATP-binding protein rbh
ABC-type transporter, ATPase component: HAAT family {ECO:0000313|EMBL:ADZ72255.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_750_p_scaffold_1298_15
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19832..20818)
DNA (987bp) protein (329aa)
Putative branched-chain amino acid ABC transporter (Permease protein) livM-like protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J4K4_POLGS
branched-chain amino acid ABC transporter permease; K01998 branched-chain amino acid transport system permease protein rbh
Putative branched-chain amino acid ABC transporter (Permease protein) livM-like protein {ECO:0000313|EMBL:ADZ72256.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_750_p_scaffold_1298_16
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20824..21696)
DNA (873bp) protein (291aa)
Putative Branched-chain amino acid ABC transporter (Permease protein) livH-like protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J4K5_POLGS
branched-chain amino acid ABC transporter permease; K01997 branched-chain amino acid transport system permease protein rbh
Putative Branched-chain amino acid ABC transporter (Permease protein) livH-like protein {ECO:0000313|EMBL:ADZ72257.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_750_p_scaffold_1298_17
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21762..23009)
DNA (1248bp) protein (416aa)
ABC transporter, substrate-binding protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J4K6_POLGS
ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein rbh
ABC transporter, substrate-binding protein {ECO:0000313|EMBL:ADZ72258.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_750_p_scaffold_1298_18
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23009..23935)
DNA (927bp) protein (309aa)
Regulatory protein GntR, HTH:UbiC transcription regulator-associated n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J4K7_POLGS
GntR family transcriptional regulator; K03710 GntR family transcriptional regulator rbh
Regulatory protein GntR, HTH:UbiC transcription regulator-associated {ECO:0000313|EMBL:ADZ72259.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_750_p_scaffold_1298_19
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24022..24579
DNA (558bp) protein (186aa)
Tautomerase, putative n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J4K8_POLGS
Tautomerase
Tautomerase, putative {ECO:0000313|EMBL:ADZ72260.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_750_p_scaffold_1298_20
Mycobacterium mageritense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24693..25961)
DNA (1269bp) protein (423aa)
Extracellular ligand-binding receptor n=1 Tax=Mycobacterium smegmatis MKD8 RepID=L8FIH6_MYCSM
ABC transporter periplasmic protein {ECO:0000313|EMBL:CDO20661.1}; Flags: Precursor;; TaxID=53462 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium mageritense.;"
extracellular ligand-binding receptor rbh
SCNpilot_cont_750_p_scaffold_1298_21
Mycobacterium mageritense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25958..26719)
DNA (762bp) protein (254aa)
ABC-type transport system ATP-binding protein I n=1 Tax=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) RepID=A0QRS1_MYCS2
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDO20660.1}; TaxID=53462 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium mageritense.;"
branched-chain amino acid ABC transporter ATP-binding protein rbh
SCNpilot_cont_750_p_scaffold_1298_22
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26716..27429)
DNA (714bp) protein (238aa)
ABC-type transport system ATP-binding protein II n=1 Tax=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) RepID=A0QRS2_MYCS2
ABC transporter ATP-binding protein rbh
ABC-type transport system ATP-binding protein II {ECO:0000313|EMBL:ABK76056.1}; Branched-chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:AFP37659.1}; TaxID=246196 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155).;"
SCNpilot_cont_750_p_scaffold_1298_23
Mycobacterium mageritense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27426..28376)
DNA (951bp) protein (317aa)
ABC-type transport system permease protein II n=1 Tax=Mycobacterium smegmatis MKD8 RepID=L8FHL4_MYCSM
ABC transporter permease {ECO:0000313|EMBL:CDO20658.1}; TaxID=53462 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium mageritense.;"
inner-membrane translocator rbh
Displaying 23 items

View Taxonomy