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SCNpilot_cont_750_p_scaffold_1639

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_1639_trna_1
unknown

Not on your lists

comp(1..69)
DNA (69bp)
transferRNA
SCNpilot_cont_750_p_scaffold_1639_1
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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262..549
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TE05_MESCW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV12177.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_750_p_scaffold_1639_2
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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672..2087
DNA (1416bp) protein (472aa)
Magnesium transporter n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FE11_9RHIZ
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
magnesium transporter; K06213 magnesium transporter
SCNpilot_cont_750_p_scaffold_1639_3
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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2111..2968
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8U011_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EDP62323.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_1639_4
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3032..3418
DNA (387bp) protein (129aa)
MerR family transcriptional regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HRI6_9RHIZ
Transcriptional regulator, MerR family {ECO:0000313|EMBL:CDX26153.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
MerR family transcriptional regulator
SCNpilot_cont_750_p_scaffold_1639_5
Mesorhizobium sp. L2C067A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3441..3890)
DNA (450bp) protein (150aa)
ArsR family transcriptional regulator n=1 Tax=Mesorhizobium sp. LNJC394B00 RepID=V7G5N0_9RHIZ
ArsR family transcriptional regulator {ECO:0000313|EMBL:ESZ33280.1}; TaxID=1287106 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C067A000.;"
transcriptional regulator AsnC-type-like protein
SCNpilot_cont_750_p_scaffold_1639_6
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4029..7682
DNA (3654bp) protein (1218aa)
Fused DNA-binding transcriptional regulator proline dehydrogenase pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:CDX44553.1}; EC=1.2.1.88 {ECO:0000313|EMBL:CDX44553.1};; EC=1.5.5.2 {ECO:0000313|EMBL:CDX44553.1};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12 1.5.99.8); K13821 proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.99.8 1.5.1.12]
Fused DNA-binding transcriptional regulator proline dehydrogenase pyrroline-5-carboxylate dehydrogenase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EU99_9RHIZ
SCNpilot_cont_750_p_scaffold_1639_7
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7817..8770)
DNA (954bp) protein (318aa)
ABC transporter permease n=1 Tax=Rhizobium loti RepID=UPI0003752454
ABC transporter permease; K01992 ABC-2 type transport system permease protein rbh
ABC transporter permease protein {ECO:0000313|EMBL:ABG64496.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_750_p_scaffold_1639_8
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8760..9713)
DNA (954bp) protein (318aa)
ABC transporter related protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11DN0_MESSB
ABC transporter; K01990 ABC-2 type transport system ATP-binding protein
ABC transporter related protein {ECO:0000313|EMBL:ABG64495.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_750_p_scaffold_1639_9
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9710..10894)
DNA (1185bp) protein (395aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00035E5F75
Uncharacterized protein {ECO:0000313|EMBL:CDX11827.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_1639_10
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11138..11563)
DNA (426bp) protein (142aa)
HIT family hydrolase n=1 Tax=Nitratireductor indicus C115 RepID=K2P0P2_9RHIZ
HIT family hydrolase {ECO:0000313|EMBL:EKF43769.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
HIT family hydrolase, diadenosine tetraphosphate hydrolase
SCNpilot_cont_750_p_scaffold_1639_11
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11631..11966
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F73A7B
Multidrug transporter {ECO:0000313|EMBL:EZQ13860.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
small multidrug resistance protein; K03297 small multidrug resistance protein, SMR family
SCNpilot_cont_750_p_scaffold_1639_12
Mesorhizobium sp. LSJC269B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11935..13176)
DNA (1242bp) protein (414aa)
UPI0003CEC3B1 related cluster n=1 Tax=unknown RepID=UPI0003CEC3B1
Uncharacterized protein {ECO:0000313|EMBL:ESW88530.1}; TaxID=1287326 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC269B00.;"
hypothetical protein; K09919 hypothetical protein
SCNpilot_cont_750_p_scaffold_1639_13
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13227..13952)
DNA (726bp) protein (242aa)
Probable phosphodiesterase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98MA7_RHILO
phosphodiesterase
Probable phosphodiesterase {ECO:0000313|EMBL:BAB48206.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_750_p_scaffold_1639_14
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13957..14421)
DNA (465bp) protein (155aa)
PREDICTED: protein MMF1, mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1670C
Endoribonuclease {ECO:0000313|EMBL:EZQ13857.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
endoribonuclease L-PSP
SCNpilot_cont_750_p_scaffold_1639_15
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14550..15377
DNA (828bp) protein (276aa)
ATP-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000379617A
Uncharacterized protein {ECO:0000313|EMBL:CDX39047.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_1639_16
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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15486..15809
DNA (324bp) protein (108aa)
ArsR family transcriptional regulator n=1 Tax=Pseudomonas pyrrocinia RepID=UPI000313B87B
ArsR family transcriptional regulator {ECO:0000313|EMBL:KJC37137.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
ArsR family transcriptional regulator
SCNpilot_cont_750_p_scaffold_1639_17
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15806..16237
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2GJ64_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:EJL30130.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
activator of Hsp90 ATPase 1 family protein
SCNpilot_cont_750_p_scaffold_1639_18
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16315..16527
DNA (213bp) protein (71aa)
membrane protein n=1 Tax=Rhizobium meliloti RepID=UPI000366044E
Uncharacterized protein {ECO:0000313|EMBL:AJD41526.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_1639_19
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


16720..17535
DNA (816bp) protein (272aa)
UPI0003CE2EC1 related cluster n=1 Tax=unknown RepID=UPI0003CE2EC1
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
30S ribosomal protein S2; K02967 small subunit ribosomal protein S2
SCNpilot_cont_750_p_scaffold_1639_20
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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17661..18584
DNA (924bp) protein (308aa)
Elongation factor Ts n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HVY5_9RHIZ
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
translation elongation factor Ts; K02357 elongation factor Ts
SCNpilot_cont_750_p_scaffold_1639_21
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18680..19402
DNA (723bp) protein (241aa)
pyrH; uridylate kinase; K09903 uridylate kinase [EC:2.7.4.22] rbh
Uridylate kinase {ECO:0000255|HAMAP-Rule:MF_01220}; Short=UK {ECO:0000255|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000255|HAMAP-Rule:MF_01220};; Uridine monophosphate kinase {ECO:0000255|HAMAP-Rule:MF_01220}; Short=UMP kinase {ECO:0000255|HAMAP-Rule:MF_01220};; Short=UMPK {ECO:0000255|HAMAP-Rule:MF_01220};; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
Uridylate kinase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=PYRH_MESSB
SCNpilot_cont_750_p_scaffold_1639_22
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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19473..20033
DNA (561bp) protein (187aa)
Ribosome-recycling factor n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=RRF_MESSB
frr; ribosome recycling factor; K02838 ribosome recycling factor
Ribosome-recycling factor {ECO:0000255|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000255|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000255|HAMAP-Rule:MF_00040}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_750_p_scaffold_1639_23
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20069..20788
DNA (720bp) protein (240aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
UDP pyrophosphate synthetase; K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31]
UDP pyrophosphate synthase n=1 Tax=Hoeflea sp. 108 RepID=UPI00037C65A5
SCNpilot_cont_750_p_scaffold_1639_24
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20830..21639
DNA (810bp) protein (270aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
phosphatidate cytidylyltransferase; K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41]
Phosphatidate cytidylyltransferase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HVY9_9RHIZ
SCNpilot_cont_750_p_scaffold_1639_25
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21726..22862
DNA (1137bp) protein (379aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
UPI0003CEB578 related cluster n=1 Tax=unknown RepID=UPI0003CEB578
putative membrane-associated Zn-dependent protease
SCNpilot_cont_750_p_scaffold_1639_26
unknown

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23085..23186
DNA (102bp) protein (34aa)

This feature has no annotations

Displaying 27 items

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