ggKbase home page

SCNpilot_cont_750_p_scaffold_1662

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_1662_1
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

288..611
DNA (324bp) protein (108aa)
Insertion element IS401 uncharacterized 12.4 kDa protein n=1 Tax=Burkholderia multivorans (strain ATCC 17616 / 249) RepID=YISX_BURM1
IS401 transposase
Insertion element IS401 uncharacterized 12.4 kDa protein; TaxID=395019 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia multivorans (strain ATCC 17616 / 249).;"
SCNpilot_cont_750_p_scaffold_1662_2
Nitrosomonas eutropha, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

761..1258
DNA (498bp) protein (166aa)
Integrase, catalytic region n=1 Tax=Nitrosomonas eutropha (strain C91) RepID=Q0AEW2_NITEC
integrase catalytic subunit
Integrase, catalytic region {ECO:0000313|EMBL:ABI59623.1}; TaxID=335283 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas eutropha (strain C91).;"
SCNpilot_cont_750_p_scaffold_1662_3
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1764..2291)
DNA (528bp) protein (176aa)
Transposase IS4 family protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GFX8_NITSI
transposase IS4 family protein
Transposase IS4 family protein {ECO:0000313|EMBL:AEJ02704.1}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (strain Is79A3).;"
SCNpilot_cont_750_p_scaffold_1662_4
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2367..4121
DNA (1755bp) protein (585aa)
Bilirubin oxidase (EC:1.3.3.5); K08100 bilirubin oxidase [EC:1.3.3.5] rbh
Bilirubin oxidase {ECO:0000313|EMBL:ABB74977.1}; EC=1.3.3.5 {ECO:0000313|EMBL:ABB74977.1};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Bilirubin oxidase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8E4_NITMU
SCNpilot_cont_750_p_scaffold_1662_5
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4152..5045
DNA (894bp) protein (298aa)
Universal stress protein family 4 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIH6_9PROT
Universal stress protein family 4 {ECO:0000313|EMBL:KIO49196.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein rbh
SCNpilot_cont_750_p_scaffold_1662_6
unknown

Not on your lists

5318..6133
DNA (816bp) protein (272aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_1662_7
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6513..6878)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8H4_NITMU
transport-associated protein
Uncharacterized protein {ECO:0000313|EMBL:ABB74947.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_750_p_scaffold_1662_8
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7035..9704)
DNA (2670bp) protein (890aa)
GCN5-related N-acetyltransferase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8E7_NITMU
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABB74974.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
GCN5-like N-acetyltransferase; K09181 hypothetical protein rbh
SCNpilot_cont_750_p_scaffold_1662_9
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9748..10221)
DNA (474bp) protein (158aa)
HoxW protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8E8_NITMU
HoxW protein
HoxW protein {ECO:0000313|EMBL:ABB74973.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_750_p_scaffold_1662_10
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10221..11705)
DNA (1485bp) protein (495aa)
NAD-reducing hydrogenase subunit HoxH {ECO:0000313|EMBL:CCU61211.1}; EC=1.12.1.2 {ECO:0000313|EMBL:CCU61211.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
NAD-reducing hydrogenase subunit HoxH n=1 Tax=Nitrosospira sp. APG3 RepID=M5DF08_9PROT
nickel-dependent hydrogenase, large subunit rbh
SCNpilot_cont_750_p_scaffold_1662_11
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11718..12275)
DNA (558bp) protein (186aa)
hydrogen dehydrogenase (EC:1.12.1.2); K00436 hydrogen dehydrogenase [EC:1.12.1.2] rbh
Hydrogen dehydrogenase {ECO:0000313|EMBL:ABB74970.1}; EC=1.12.1.2 {ECO:0000313|EMBL:ABB74970.1};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Hydrogen dehydrogenase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8F1_NITMU
SCNpilot_cont_750_p_scaffold_1662_12
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12265..12990)
DNA (726bp) protein (242aa)
hydrogen dehydrogenase (EC:1.12.1.2); K00436 hydrogen dehydrogenase [EC:1.12.1.2] rbh
Hydrogen dehydrogenase {ECO:0000313|EMBL:ABB74969.1}; EC=1.12.1.2 {ECO:0000313|EMBL:ABB74969.1};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Hydrogen dehydrogenase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8F2_NITMU
SCNpilot_cont_750_p_scaffold_1662_13
unknown

Not on your lists

13161..13418
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_1662_14
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13448..14794)
DNA (1347bp) protein (449aa)
hydrogen dehydrogenase (EC:1.12.1.2); K00436 hydrogen dehydrogenase [EC:1.12.1.2] rbh
NAD(P)-dependent nickel-iron dehydrogenase flavin-containing subunit {ECO:0000313|EMBL:ABB74968.1}; EC=1.12.1.2 {ECO:0000313|EMBL:ABB74968.1};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
NAD(P)-dependent nickel-iron dehydrogenase flavin-containing subunit n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8F3_NITMU
SCNpilot_cont_750_p_scaffold_1662_15
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14800..15852)
DNA (1053bp) protein (351aa)
Hydrogenase expression/formation protein HypE n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8F4_NITMU
hydrogenase expression/formation protein HypE; K04655 hydrogenase expression/formation protein HypE rbh
Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:ABB74967.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_750_p_scaffold_1662_16
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15797..18085)
DNA (2289bp) protein (763aa)
[NiFe] hydrogenase metallocenter assembly protein HypF n=1 Tax=Nitrosospira sp. APG3 RepID=M5DF09_9PROT
[NiFe] hydrogenase metallocenter assembly protein HypF {ECO:0000313|EMBL:CCU61216.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
(NiFe) hydrogenase maturation protein HypF; K04656 hydrogenase maturation protein HypF rbh
SCNpilot_cont_750_p_scaffold_1662_17
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18169..19323)
DNA (1155bp) protein (385aa)
Hydrogenase formation HypD protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8F6_NITMU
hydrogenase formation HypD protein; K04654 hydrogenase expression/formation protein HypD rbh
Hydrogenase formation HypD protein {ECO:0000313|EMBL:ABB74965.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_750_p_scaffold_1662_18
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19320..20114)
DNA (795bp) protein (265aa)
Hydrogenase accessory protein HypB n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8F7_NITMU
hydrogenase accessory protein HypB; K04652 hydrogenase nickel incorporation protein HypB rbh
Hydrogenase accessory protein HypB {ECO:0000313|EMBL:ABB74964.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_750_p_scaffold_1662_19
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20133..20510)
DNA (378bp) protein (126aa)
Probable hydrogenase nickel incorporation protein HypA n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=HYPA_NITMU
hydrogenase expression/synthesis, HypA; K04651 hydrogenase nickel incorporation protein HypA/HybF
Probable hydrogenase nickel incorporation protein HypA {ECO:0000255|HAMAP-Rule:MF_00213}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_750_p_scaffold_1662_20
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20473..20709)
DNA (237bp) protein (79aa)
Hydrogenase assembly chaperone hypC/hupF n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8F9_NITMU
hydrogenase assembly chaperone HypC/HupF; K04653 hydrogenase expression/formation protein HypC
Hydrogenase assembly chaperone hypC/hupF {ECO:0000313|EMBL:ABB74962.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_750_p_scaffold_1662_21
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20961..22088)
DNA (1128bp) protein (376aa)
Metal dependent phosphohydrolase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8G0_NITMU
metal dependent phosphohydrolase rbh
Metal dependent phosphohydrolase {ECO:0000313|EMBL:ABB74961.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_750_p_scaffold_1662_22
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22576..22899
DNA (324bp) protein (108aa)
Putative uncharacterized protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IS02_9GAMM
ABC transporter permease {ECO:0000313|EMBL:KIO48240.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
ABC transporter; K02066 putative ABC transport system permease protein
Displaying 22 items

View Taxonomy