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SCNpilot_cont_750_p_scaffold_1711

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_1711_1
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..718)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NPB5_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS30976.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_1711_2
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(835..1122)
DNA (288bp) protein (96aa)
Putative membrane protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JAM2_OLICO
hypothetical protein
Putative transmembrane protein {ECO:0000313|EMBL:AEI05004.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_750_p_scaffold_1711_3
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1191..1451)
DNA (261bp) protein (87aa)
Hemerythrin HHE cation binding protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JAM3_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI05003.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_750_p_scaffold_1711_4
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2103..2678
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3D5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:AKH98806.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
SCNpilot_cont_750_p_scaffold_1711_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2678..2944
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07M05_RHOP5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ07029.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
SCNpilot_cont_750_p_scaffold_1711_6
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3192..3467
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI000369BE8E
Uncharacterized protein {ECO:0000313|EMBL:KJS10184.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_1711_7
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3499..4680)
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003677056
NnrS protein {ECO:0000313|EMBL:BAQ16583.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
NnrS family protein; K07234 uncharacterized protein involved in response to NO
SCNpilot_cont_750_p_scaffold_1711_8
Methylobacterium radiotolerans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4677..5369)
DNA (693bp) protein (231aa)
NnrUfamily protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M115_METRJ
NnrU family protein
NnrUfamily protein {ECO:0000313|EMBL:ACB24565.1}; Flags: Precursor;; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;"
SCNpilot_cont_750_p_scaffold_1711_9
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5521..6012
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000365E074
Nitrite-sensitive transcriptional repressor NsrR {ECO:0000313|EMBL:ESR23426.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
hypothetical protein; K13771 Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
SCNpilot_cont_750_p_scaffold_1711_10
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6096..6491
DNA (396bp) protein (132aa)
ferredoxin n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036B2C42
Ferredoxin {ECO:0000313|EMBL:AHB47817.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; K05524 ferredoxin
SCNpilot_cont_750_p_scaffold_1711_11
Corynebacterium glutamicum, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6484..7857
DNA (1374bp) protein (458aa)
Cgl2538; hypothetical protein; K01720 2-methylcitrate dehydratase [EC:4.2.1.79] rbh
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI00035CBC2F
2-methylcitrate dehydratase {ECO:0000313|EMBL:KEI24108.1}; TaxID=1079988 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium glutamicum ATCC 14067.;"
SCNpilot_cont_750_p_scaffold_1711_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7885..8700
DNA (816bp) protein (272aa)
phosphosulfolactate synthase ComA (EC:4.4.1.19) rbh
Phosphosulfolactate synthase ComA {ECO:0000313|EMBL:AGG89629.1}; EC=4.4.1.19 {ECO:0000313|EMBL:AGG89629.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI000364E346
SCNpilot_cont_750_p_scaffold_1711_13
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8823..10187)
DNA (1365bp) protein (455aa)
Putative arylsulfatase regulatory protein n=1 Tax=Rhodobacter sp. AKP1 RepID=L1KGI6_9RHOB
Sulfatase maturase {ECO:0000313|EMBL:KGE02182.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
hypothetical protein; K06871 uncharacterized protein rbh
SCNpilot_cont_750_p_scaffold_1711_14
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10782..11327
DNA (546bp) protein (182aa)
Lipid carrier protein-like protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B9J8_9RHIZ
lipid carrier protein-like protein
Lipid carrier protein-like protein {ECO:0000313|EMBL:AGK56765.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_750_p_scaffold_1711_15
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11324..12325
DNA (1002bp) protein (334aa)
Peptidase U32 n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B892_9RHIZ
peptidase U32 rbh
Peptidase U32 {ECO:0000313|EMBL:AGK56766.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_750_p_scaffold_1711_16
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12330..13229
DNA (900bp) protein (300aa)
Protease n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B3H5_9RHIZ
protease rbh
Protease {ECO:0000313|EMBL:AGK56767.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_750_p_scaffold_1711_17
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13230..14513
DNA (1284bp) protein (428aa)
Cytochrome P450 n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B1D2_9RHIZ
cytochrome P450 rbh
Cytochrome P450 {ECO:0000313|EMBL:AGK56768.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_750_p_scaffold_1711_18
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14568..14963)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GSZ5_PUSST
Uncharacterized protein {ECO:0000313|EMBL:CDM25973.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
hypothetical protein; K09943 hypothetical protein
SCNpilot_cont_750_p_scaffold_1711_19
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15104..16093)
DNA (990bp) protein (330aa)
cysteine synthase A; K01738 cysteine synthase A [EC:2.5.1.47]
UPI0003CDF3CB related cluster n=1 Tax=unknown RepID=UPI0003CDF3CB
Cysteine synthase {ECO:0000313|EMBL:EZQ13174.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
SCNpilot_cont_750_p_scaffold_1711_20
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16352..17413
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NU47_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS30980.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein rbh
SCNpilot_cont_750_p_scaffold_1711_21
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17504..18202)
DNA (699bp) protein (233aa)
cyclic nucleotide-binding protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B49B3A
Anaerobic regulatory protein {ECO:0000313|EMBL:CEG07033.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
nnrR; Nitrite and nitric oxide reductase transcriptional regulator (Crp/Fnr family)
SCNpilot_cont_750_p_scaffold_1711_22
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18475..19149
DNA (675bp) protein (225aa)
alternative oxidase 1 n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B628DB
Alternative oxidase {ECO:0000313|EMBL:CEG07034.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
oxidase
SCNpilot_cont_750_p_scaffold_1711_23
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19342..19887
DNA (546bp) protein (182aa)
Ferrous iron transporter n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0AZZ5_9RHIZ
Ferrous iron transporter
Ferrous iron transporter {ECO:0000313|EMBL:AGK56774.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_750_p_scaffold_1711_24
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19979..20332
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B1D7_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK56773.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_750_p_scaffold_1711_25
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20329..21177
DNA (849bp) protein (283aa)
Iron permease FTR1 n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MW2_MESSB
iron permease FTR1; K07243 high-affinity iron transporter rbh
Iron permease FTR1 {ECO:0000313|EMBL:ABG61257.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_750_p_scaffold_1711_26
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21177..22271
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B3I1_9RHIZ
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGK56772.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
Displaying 26 items

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