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SCNpilot_cont_750_p_scaffold_1797

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_1797_1

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3..680
DNA (678bp) protein (226aa)
phosphoserine phosphatase (EC:3.1.3.3); K01079 phosphoserine phosphatase [EC:3.1.3.3]
Phosphoserine phosphatase SerB n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VFU1_CAUST
Phosphoserine phosphatase SerB {ECO:0000313|EMBL:AIA16259.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_cont_750_p_scaffold_1797_2
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(731..2161)
DNA (1431bp) protein (477aa)
Serine endoprotease n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AKF7_AZOBR
Protease Do {ECO:0000313|EMBL:GAK44837.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
degP2; serine endoprotease
SCNpilot_cont_750_p_scaffold_1797_3

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2424..3545
DNA (1122bp) protein (374aa)
sodium:proton antiporter n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B4BEA7
ParA/MinD ATPase like {ECO:0000313|EMBL:AIA18226.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein; K03593 ATP-binding protein involved in chromosome partitioning rbh
SCNpilot_cont_750_p_scaffold_1797_4

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comp(3546..4019)
DNA (474bp) protein (158aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Dihydrofolate reductase n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NE43_9SPHN
dihydrofolate reductase
SCNpilot_cont_750_p_scaffold_1797_5

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comp(4030..4512)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Salinimonas chungwhensis RepID=UPI000365A3AA
Acetyltransferase (GNAT) family {ECO:0000313|EMBL:AIA14961.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
acetyltransferase, GNAT family
SCNpilot_cont_750_p_scaffold_1797_6

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4615..5370
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T4Y2_CAUSK
Uncharacterized protein {ECO:0000313|EMBL:AIA17385.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_1797_7
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5547..6836
DNA (1290bp) protein (430aa)
adenylosuccinate synthase; K01939 adenylosuccinate synthase [EC:6.3.4.4]
Adenylosuccinate synthetase {ECO:0000255|HAMAP-Rule:MF_00011}; Short=AMPSase {ECO:0000255|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000255|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000255|HAMAP-Rule:MF_00011};; IMP--aspartate ligase {ECO:0000255|HAMAP-Rule:MF_00011}; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
Adenylosuccinate synthetase n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=PURA_METPB
SCNpilot_cont_750_p_scaffold_1797_8
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6852..7541
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z9N6_AZOL4
Membrane protein {ECO:0000313|EMBL:KJR65618.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
putative protein disulfide oxidoreductase
SCNpilot_cont_750_p_scaffold_1797_9
unknown

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7647..7799
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_1797_10
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7802..8092)
DNA (291bp) protein (97aa)
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:CCQ73324.1}; EC=2.7.4.7 {ECO:0000313|EMBL:CCQ73324.1};; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
phosphomethylpyrimidine kinase type-2; K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
Hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase n=1 Tax=Deinococcus geothermalis (strain DSM 11300) RepID=Q1IX20_DEIGD
SCNpilot_cont_750_p_scaffold_1797_11
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8117..8590)
DNA (474bp) protein (158aa)
phosphomethylpyrimidine kinase (EC:2.7.4.7); K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:ABC21903.1}; EC=2.7.4.7 {ECO:0000313|EMBL:ABC21903.1};; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;"
Phosphomethylpyrimidine kinase n=2 Tax=Rhodospirillum rubrum RepID=G2TEE8_RHORU
SCNpilot_cont_750_p_scaffold_1797_12
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8595..9938)
DNA (1344bp) protein (448aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078319}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078300};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
phosphoglucosamine mutase; K03431 phosphoglucosamine mutase [EC:5.4.2.10] rbh
Phosphoglucosamine mutase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=GLMM_PARL1
SCNpilot_cont_750_p_scaffold_1797_13
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10047..10859)
DNA (813bp) protein (271aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205, ECO:0000313|EMBL:CDO58899.1}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205, ECO:0000313|EMBL:CDO58899.1};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
dihydropteroate synthase; K00796 dihydropteroate synthase [EC:2.5.1.15]
Dihydropteroate synthase n=1 Tax=alpha proteobacterium IMCC14465 RepID=J9DWQ5_9PROT
SCNpilot_cont_750_p_scaffold_1797_14
Elizabethkingia sp. BM10, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(10859..11143)
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B77F30
Uncharacterized protein {ECO:0000313|EMBL:AJW61807.1}; TaxID=722877 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia sp. BM10.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_1797_15
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11360..13291)
DNA (1932bp) protein (644aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
ATP-dependent metalloprotease FtsH; K03798 cell division protease FtsH [EC:3.4.24.-]
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HV07_PARL1
SCNpilot_cont_750_p_scaffold_1797_16

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comp(13467..14435)
DNA (969bp) protein (323aa)
ATPase; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
Putative PP-loop superfamily ATPase n=1 Tax=uncultured organism RepID=Q1EI29_9ZZZZ
Putative PP-loop superfamily ATPase {ECO:0000313|EMBL:CAK32581.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
SCNpilot_cont_750_p_scaffold_1797_17
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14569..15636)
DNA (1068bp) protein (356aa)
Tol-pal system protein YbgF n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A781_STAND
tol-pal system protein YbgF
Tol-pal system protein YbgF {ECO:0000313|EMBL:ADH90312.1}; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_750_p_scaffold_1797_18
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15773..16303)
DNA (531bp) protein (177aa)
Peptidoglycan-associated lipoprotein pal n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8H447_CAUCN
pal; peptidoglycan-associated lipoprotein pal; K03640 peptidoglycan-associated lipoprotein
OmpA family protein {ECO:0000313|EMBL:AAK25191.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
SCNpilot_cont_750_p_scaffold_1797_19
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16453..17778)
DNA (1326bp) protein (442aa)
Protein TolB n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IX62_POLGS
translocation protein TolB; K03641 TolB protein
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; Flags: Precursor;; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_750_p_scaffold_1797_20
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(17804..18670)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HV02_PARL1
Conserved protein {ECO:0000313|EMBL:GAK46559.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_1797_21
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(18639..19091)
DNA (453bp) protein (151aa)
biopolymer transporter ExbD n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003A3B9B7
Biopolymer transport protein {ECO:0000313|EMBL:EDP63056.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
biopolymer transport TolR; K03560 biopolymer transport protein TolR
SCNpilot_cont_750_p_scaffold_1797_22
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(19091..19963)
DNA (873bp) protein (291aa)
Protein TolQ n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A786_STAND
protein TolQ; K03562 biopolymer transport protein TolQ
Protein TolQ {ECO:0000313|EMBL:ADH90317.1}; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_750_p_scaffold_1797_23
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(20035..20490)
DNA (456bp) protein (152aa)
hypothetical protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-]
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R9Z3_PHEZH
4-hydroxybenzoyl-CoA thioesterase family active site {ECO:0000313|EMBL:GAM96452.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
SCNpilot_cont_750_p_scaffold_1797_24
RBG_16_Alphaproteobacteria_64_48_curated, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(20487..21347)
DNA (861bp) protein (287aa)
ruvB; Holliday junction DNA helicase RuvB (EC:3.6.1.-); K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12]
Holliday junction ATP-dependent DNA helicase RuvB n=2 Tax=Rhodospirillum rubrum RepID=RUVB_RHORT
Tax=RBG_16_Alphaproteobacteria_64_48_curated
Displaying 24 items

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