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SCNpilot_cont_750_p_scaffold_1829

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_1829_1
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(43..714)
DNA (672bp) protein (224aa)
Periplasmic component of amino acid ABC-type transporter/signal transduction system n=1 Tax=Phyllobacterium sp. YR531 RepID=J3CIS9_9RHIZ
Periplasmic component of amino acid ABC-type transporter/signal transduction system {ECO:0000313|EMBL:EJN06724.1}; Flags: Precursor;; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
amino acid ABC transporter
SCNpilot_cont_750_p_scaffold_1829_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1080..2432)
DNA (1353bp) protein (451aa)
Opine oxidase subunit A (Octopine oxidase subunit A) {ECO:0000313|EMBL:KFC71673.1}; EC=1.-.-.- {ECO:0000313|EMBL:KFC71673.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D787A8
oxidase rbh
SCNpilot_cont_750_p_scaffold_1829_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2688..3884)
DNA (1197bp) protein (399aa)
Opine oxidase subunit B (Octopine oxidase subunit B) {ECO:0000313|EMBL:KFC71671.1}; EC=1.-.-.- {ECO:0000313|EMBL:KFC71671.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003070D33
FAD dependent oxidoreductase rbh
SCNpilot_cont_750_p_scaffold_1829_4
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4159..4776)
DNA (618bp) protein (206aa)
Transcriptional regulator, TetR-family n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9HY84_BORPD
TetR family transcriptional regulator
Transcriptional regulator, TetR-family {ECO:0000313|EMBL:CAP40697.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
SCNpilot_cont_750_p_scaffold_1829_5
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5109..5858
DNA (750bp) protein (250aa)
Electron transfer flavoprotein, beta subunit n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V3U5_9RHIZ
Electron transfer flavoprotein, beta subunit {ECO:0000313|EMBL:ENN88530.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
electron transfer flavoprotein subunit beta rbh
SCNpilot_cont_750_p_scaffold_1829_6
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5886..6821
DNA (936bp) protein (312aa)
Electron transfer flavoprotein subunit alpha n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LN21_RHITR
Electron transfer flavoprotein subunit beta {ECO:0000313|EMBL:KJF69979.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
electron transfer flavoprotein subunit alpha
SCNpilot_cont_750_p_scaffold_1829_7
Rhizobium sp. R2-400B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6871..7746
DNA (876bp) protein (292aa)
D-amino acid aminotransferase {ECO:0000313|EMBL:KEQ10612.1}; EC=2.6.1.21 {ECO:0000313|EMBL:KEQ10612.1};; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R2-400B4.;"
Aminotransferase, class IV; K00824 D-alanine transaminase [EC:2.6.1.21] rbh
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00036C416F
SCNpilot_cont_750_p_scaffold_1829_8
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7834..9504
DNA (1671bp) protein (557aa)
glutamate synthase, large chain (EC:1.4.1.14) rbh
glutamate synthase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002DFF127
Glutamate synthase {ECO:0000313|EMBL:EXL02421.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
SCNpilot_cont_750_p_scaffold_1829_9
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9651..10853)
DNA (1203bp) protein (401aa)
Beta-ketoadipyl CoA thiolase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QID8_9RHIZ
Beta-ketoadipyl CoA thiolase {ECO:0000313|EMBL:EKF60876.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
pcaF; beta-ketoadipyl CoA thiolase
SCNpilot_cont_750_p_scaffold_1829_10
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10882..12906)
DNA (2025bp) protein (675aa)
Peroxisomal bifunctional enzyme n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LLW7_RHITR
peroxisomal bifunctional enzyme
Peroxisomal bifunctional enzyme {ECO:0000313|EMBL:AGB72237.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_750_p_scaffold_1829_11
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13005..14156)
DNA (1152bp) protein (384aa)
dcaA; butyryl-CoA dehydrogenase; K06446 acyl-CoA dehydrogenase [EC:1.3.99.-] rbh
Butyryl-CoA dehydrogenase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZBR0_AZOL4
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EZQ17707.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
SCNpilot_cont_750_p_scaffold_1829_12
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14375..15751)
DNA (1377bp) protein (459aa)
Gamma aminobutyrate transaminase 1, mitochondrial {ECO:0000313|EMBL:CDX13138.1}; EC=2.6.1.96 {ECO:0000313|EMBL:CDX13138.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
aminotransferase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002DC0E6D
aminotransferase
SCNpilot_cont_750_p_scaffold_1829_13
Erwinia typographi, Erwinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15814..16611)
DNA (798bp) protein (266aa)
Cystine-binding protein n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8H5Q5_CAUCN
Cystine transporter subunit {ECO:0000313|EMBL:KGT95994.1}; TaxID=371042 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Erwinia.;" source="Erwinia typographi.;"
cystine transporter subunit; K02424 cystine transport system substrate-binding protein
SCNpilot_cont_750_p_scaffold_1829_14
Ochrobactrum sp. CDB2, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16699..17544)
DNA (846bp) protein (282aa)
Extracellular solute-binding protein n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3J260_9RHIZ
Extracellular solute-binding protein {ECO:0000313|EMBL:EMG53031.1}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. CDB2.;"
extracellular solute-binding protein; K10018 octopine/nopaline transport system substrate-binding protein
SCNpilot_cont_750_p_scaffold_1829_15
Pseudomonas fulva, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17697..18311)
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Erwinia toletana RepID=UPI00037B353E
TetR family transcriptional regulator
Regulatory protein TetR {ECO:0000313|EMBL:AEF21263.1}; TaxID=743720 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fulva (strain 12-X).;"
SCNpilot_cont_750_p_scaffold_1829_16
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18698..19441
DNA (744bp) protein (248aa)
Octopine ABC transporter permease n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I299_9RHIZ
Octopine ABC transporter permease {ECO:0000313|EMBL:EHK52898.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
putative amino acid ABC transporter, permease protein
SCNpilot_cont_750_p_scaffold_1829_17
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19445..20167
DNA (723bp) protein (241aa)
Octopine ABC transporter, permease n=1 Tax=Rhizobium sp. Pop5 RepID=K0WDW5_9RHIZ
Octopine ABC transporter, permease {ECO:0000313|EMBL:EJZ21579.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
putative amino acid ABC transporter, permease protein
SCNpilot_cont_750_p_scaffold_1829_18
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20164..20958
DNA (795bp) protein (265aa)
occPch; octopine ABC transporter; K10025 arginine/ornithine transport system ATP-binding protein [EC:3.6.3.-]
ABC-type histidine transport system, ATPase component n=1 Tax=Rhizobium sp. AP16 RepID=J2DAG9_9RHIZ
Amino acid transporter {ECO:0000313|EMBL:KJF72738.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
Displaying 18 items

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