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SCNpilot_cont_750_p_scaffold_1877

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_1877_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..1208
DNA (1206bp) protein (402aa)
Metal-dependent phosphohydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4A2_9GAMM
Metal-dependent phosphohydrolase {ECO:0000313|EMBL:EIL94293.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
metal-dependent phosphohydrolase rbh
SCNpilot_cont_750_p_scaffold_1877_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1258..2499
DNA (1242bp) protein (414aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4A3_9GAMM
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:EIL94294.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
diguanylate cyclase/phosphodiesterase
SCNpilot_cont_750_p_scaffold_1877_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2548..3315
DNA (768bp) protein (256aa)
ABC-type proline/glycine betaine transport system, ATPase component n=1 Tax=Rhodanobacter denitrificans RepID=M4NHK3_9GAMM
ABC-type proline/glycine betaine transport system, ATPase component rbh
ABC-type proline/glycine betaine transport system, ATPase component {ECO:0000313|EMBL:AGG89562.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_p_scaffold_1877_4
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3312..4802
DNA (1491bp) protein (497aa)
Glycine betaine/carnitine/choline-binding ABC transporter substrate-binding and permease component n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD93_9GAMM
periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_750_p_scaffold_1877_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4860..5390
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W0V3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93094.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_1877_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5635..6504
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD96_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97437.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative permease rbh
SCNpilot_cont_750_p_scaffold_1877_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6523..7173)
DNA (651bp) protein (217aa)
2'-5' RNA ligase n=1 Tax=Rhodanobacter denitrificans RepID=I4WWW2_9GAMM
2'-5' RNA ligase
2'-5' RNA ligase {ECO:0000313|EMBL:AGG89567.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_p_scaffold_1877_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7327..7590)
DNA (264bp) protein (88aa)
DnaK suppressor protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWW3_9GAMM
DnaK suppressor protein
DnaK suppressor protein {ECO:0000313|EMBL:AGG89568.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_p_scaffold_1877_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7785..9554
DNA (1770bp) protein (590aa)
Acyl-CoA dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WWW4_9GAMM
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EIL97441.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
acyl-CoA dehydrogenase rbh
SCNpilot_cont_750_p_scaffold_1877_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9578..9985
DNA (408bp) protein (136aa)
OsmC-like protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDA1_9GAMM
OsmC-like protein {ECO:0000313|EMBL:EIL97442.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative redox protein, regulator of disulfide bond formation
SCNpilot_cont_750_p_scaffold_1877_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10035..11258)
DNA (1224bp) protein (408aa)
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family n=1 Tax=Rhodanobacter denitrificans RepID=M4NPK7_9GAMM
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family rbh
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family {ECO:0000313|EMBL:AGG89581.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_p_scaffold_1877_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11356..11595)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WEC9_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89582.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_p_scaffold_1877_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11758..12417
DNA (660bp) protein (220aa)
Glutathione S-transferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NIT8_9GAMM
glutathione S-transferase rbh
Glutathione S-transferase {ECO:0000313|EMBL:AGG89583.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_p_scaffold_1877_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12584..13378)
DNA (795bp) protein (265aa)
Putative esterase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4B6_9GAMM
Putative esterase {ECO:0000313|EMBL:EIL94307.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
besA1; putative esterase rbh
SCNpilot_cont_750_p_scaffold_1877_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13422..14801)
DNA (1380bp) protein (460aa)
D-alanine/D-serine/glycine permease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4B7_9GAMM
D-alanine/D-serine/glycine permease {ECO:0000313|EMBL:EIL94308.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
gamma-aminobutyrate permease-like transporter rbh
SCNpilot_cont_750_p_scaffold_1877_16
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14896..15471)
DNA (576bp) protein (192aa)
2'-5' RNA ligase (EC:6.5.1.-); K01975 2'-5' RNA ligase [EC:6.5.1.-]
2',5' RNA ligase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTW3_9GAMM
2',5' RNA ligase {ECO:0000313|EMBL:EIL90654.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
SCNpilot_cont_750_p_scaffold_1877_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15533..16231)
DNA (699bp) protein (233aa)
Phosphoglycerate mutase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3L5_9GAMM
Phosphoglycerate mutase {ECO:0000313|EMBL:EIL94056.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
serine/threonine-protein phosphatase PGAM5, mitochondrial-like
SCNpilot_cont_750_p_scaffold_1877_18
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16318..19455)
DNA (3138bp) protein (1046aa)
Type III restriction protein res subunit n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XZH6_LEPCP
type III restriction protein res subunit rbh
Type III restriction protein res subunit {ECO:0000313|EMBL:ACB36539.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
SCNpilot_cont_750_p_scaffold_1877_19
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19672..20613)
DNA (942bp) protein (314aa)
Chaperone protein HtpG n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUD7_9GAMM
Chaperone protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505, ECO:0000256|SAAS:SAAS00218406}; Heat shock protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; High temperature protein G {ECO:0000256|HAMAP-Rule:MF_00505}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
molecular chaperone of HSP90 family
Displaying 19 items

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