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SCNpilot_cont_750_p_scaffold_1903

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_1903_1
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..728)
DNA (726bp) protein (242aa)
Aminodeoxychorismate synthase {ECO:0000313|EMBL:EHK57703.1}; EC=2.6.1.85 {ECO:0000313|EMBL:EHK57703.1};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
aminodeoxychorismate synthase (EC:2.6.1.85); K01665 para-aminobenzoate synthetase component I [EC:2.6.1.85]
aminodeoxychorismate synthase n=1 Tax=Hoeflea sp. 108 RepID=UPI00036E8A08
SCNpilot_cont_750_p_scaffold_1903_2
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(778..2631)
DNA (1854bp) protein (618aa)
oligoendopeptidase; K08602 oligoendopeptidase F [EC:3.4.24.-]
Oligoendopeptidase, pepF/M3 family n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FI83_9RHIZ
Oligoendopeptidase, pepF/M3 family {ECO:0000313|EMBL:CCV16070.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
SCNpilot_cont_750_p_scaffold_1903_3
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2780..4288
DNA (1509bp) protein (503aa)
Sigma-54 factor interaction domain-containing protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y2C2_9RHIZ
Sigma-54 factor interaction domain-containing protein {ECO:0000313|EMBL:EHH14105.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
sigma-54 factor interaction domain-containing protein
SCNpilot_cont_750_p_scaffold_1903_4
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4502..6235
DNA (1734bp) protein (578aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TEV9_MESCW
hypothetical protein
Peptidase M15 {ECO:0000313|EMBL:ESY88539.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
SCNpilot_cont_750_p_scaffold_1903_5
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6257..6898)
DNA (642bp) protein (214aa)
Keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase {ECO:0000313|EMBL:EIM74644.1}; EC=4.1.2.14 {ECO:0000313|EMBL:EIM74644.1};; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; K01625 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16] rbh
Keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BYJ2_9RHIZ
SCNpilot_cont_750_p_scaffold_1903_6
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6978..7880)
DNA (903bp) protein (301aa)
Peptidoglycan-binding domain 1 n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11ER4_MESSB
Peptidoglycan-binding protein {ECO:0000313|EMBL:EZQ16420.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
peptidoglycan binding domain-containing protein
SCNpilot_cont_750_p_scaffold_1903_7
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8056..8985
DNA (930bp) protein (310aa)
UPI0003CED007 related cluster n=1 Tax=unknown RepID=UPI0003CED007
UPF0176 protein MPLDJ20_60484 {ECO:0000256|HAMAP-Rule:MF_00469}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Rhodanese domain-containing protein; K07146 UPF0176 protein
SCNpilot_cont_750_p_scaffold_1903_8
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9097..9795
DNA (699bp) protein (233aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HNR2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX11357.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_1903_9
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10203..10949
DNA (747bp) protein (249aa)
Molybdenum ABC transporter periplasmic molybdenum-binding protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2LGV6_9RHIZ
Molybdenum ABC transporter periplasmic molybdenum-binding protein {ECO:0000313|EMBL:EKF17019.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
molybdenum ABC transporter, periplasmic molybdate-binding protein; K02020 molybdate transport system substrate-binding protein
SCNpilot_cont_750_p_scaffold_1903_10
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10957..11637
DNA (681bp) protein (227aa)
Molybdate ABC transporter permease protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MYG5_9RHIZ
Molybdate ABC transporter permease protein {ECO:0000313|EMBL:EKF17018.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
modB; molybdate ABC transporter permease; K02018 molybdate transport system permease protein
SCNpilot_cont_750_p_scaffold_1903_11
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11637..12746
DNA (1110bp) protein (370aa)
Molybdenum import ATP-binding protein ModC {ECO:0000256|HAMAP-Rule:MF_01705}; EC=3.6.3.29 {ECO:0000256|HAMAP-Rule:MF_01705};; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
molybdate ABC transporter ATPase; K02017 molybdate transport system ATP-binding protein [EC:3.6.3.29]
Molybdenum ABC transporter ATP-binding protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BYI3_9RHIZ
SCNpilot_cont_750_p_scaffold_1903_12
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12824..13693
DNA (870bp) protein (290aa)
Alpha/beta hydrolase domain-containing protein n=1 Tax=Burkholderia sp. TJI49 RepID=F0FXS1_9BURK
Alpha/beta hydrolase fold family protein {ECO:0000313|EMBL:AJZ62141.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
alpha/beta hydrolase domain-containing protein
SCNpilot_cont_750_p_scaffold_1903_13
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13697..14425)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2L1S2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EPC01609.1}; TaxID=1121939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas anticariensis FP35 = DSM 16096.;"
TetR family transcriptional regulator
SCNpilot_cont_750_p_scaffold_1903_14
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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14471..14908
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2LA68_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EPC01611.1}; TaxID=1121939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas anticariensis FP35 = DSM 16096.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_1903_15
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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14905..15774
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2KHJ8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EPC01612.1}; TaxID=1121939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas anticariensis FP35 = DSM 16096.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_1903_16
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15993..16745
DNA (753bp) protein (251aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HNR3_9RHIZ
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EHK57608.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
SCNpilot_cont_750_p_scaffold_1903_17
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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16891..17349
DNA (459bp) protein (153aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
Alkylhydroperoxidase AhpD family core domain protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMM7_9RHIZ
alkylhydroperoxidase
SCNpilot_cont_750_p_scaffold_1903_18
Ralstonia sp. A12, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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17349..18233
DNA (885bp) protein (295aa)
RNA polymerase sigma factor SigJ n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HV39_9RHIZ
RNA polymerase sigma factor SigJ {ECO:0000313|EMBL:KHK58243.1}; TaxID=1217052 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. A12.;"
sigJ; RNA polymerase sigma factor SigJ rbh
SCNpilot_cont_750_p_scaffold_1903_19
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18298..19182
DNA (885bp) protein (295aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJR0_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK58973.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_1903_20
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19233..19880)
DNA (648bp) protein (216aa)
UPI0003CDFA5C related cluster n=1 Tax=unknown RepID=UPI0003CDFA5C
Uncharacterized protein {ECO:0000313|EMBL:ESW91438.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_1903_21
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19932..20459)
DNA (528bp) protein (176aa)
Class I and II aminotransferase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HNS1_9RHIZ
Class I and II aminotransferase {ECO:0000313|EMBL:EHK57616.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
class I and II aminotransferase
Displaying 21 items

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