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SCNpilot_cont_750_p_scaffold_4018

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_4018_1
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(243..1448)
DNA (1206bp) protein (402aa)
NnrS n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YLR4_9RHIZ
NnrS {ECO:0000313|EMBL:EHH02542.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
NnrS; K07234 uncharacterized protein involved in response to NO rbh
SCNpilot_cont_750_p_scaffold_4018_2
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1516..2310
DNA (795bp) protein (265aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MX2_MESSB
Crp/FNR family transcriptional regulator rbh
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ABG61247.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_750_p_scaffold_4018_3
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2382..2897)
DNA (516bp) protein (172aa)
SEC-independent protein translocase protein TatC n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MW9_MESSB
Preprotein translocase subunit TatC {ECO:0000313|EMBL:EZQ15510.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
SEC-independent protein translocase protein TatC; K06886 hemoglobin
SCNpilot_cont_750_p_scaffold_4018_4
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3009..3299
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. Pop5 RepID=K0VMP6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJZ18895.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_4018_5
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3321..3851)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0AYQ3_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK56269.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_750_p_scaffold_4018_6
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3868..4296)
DNA (429bp) protein (143aa)
transcriptional regulator n=1 Tax=Rhizobium loti RepID=UPI0003782FF9
DNA-binding transcriptional regulator {ECO:0000313|EMBL:CDX53611.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
transcriptional regulator; K13771 Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
SCNpilot_cont_750_p_scaffold_4018_7
unknown

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4540..4689
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_4018_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4769..5125
DNA (357bp) protein (119aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Alkylhydroperoxidase AhpD core n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFU5_NITHX
alkylhydroperoxidase AhpD core
SCNpilot_cont_750_p_scaffold_4018_9
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5153..5725)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Mycobacterium sp. 141 RepID=UPI00037F99C7
Uncharacterized protein {ECO:0000313|EMBL:GAO38858.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_4018_10
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5826..6938
DNA (1113bp) protein (371aa)
class I and II aminotransferase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9]
Aminotransferase class I and II n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TMK5_MESCW
Aminotransferase class I and II {ECO:0000313|EMBL:ADV13950.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_750_p_scaffold_4018_11
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6980..7906)
DNA (927bp) protein (309aa)
Putative N-acetyltransferase n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KNR9_RHISN
N-acetyltransferase
Putative N-acetyltransferase {ECO:0000313|EMBL:ACP21727.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
SCNpilot_cont_750_p_scaffold_4018_12
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8132..9259
DNA (1128bp) protein (376aa)
Diguanylate cyclase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y983_9RHIZ
Diguanylate cyclase {ECO:0000313|EMBL:EHH11701.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein; K13590 diguanylate cyclase
SCNpilot_cont_750_p_scaffold_4018_13
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9281..9559)
DNA (279bp) protein (93aa)
Acylphosphatase {ECO:0000256|RuleBase:RU000553}; EC=3.6.1.7 {ECO:0000256|RuleBase:RU000553};; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
acylphosphatase; K01512 acylphosphatase [EC:3.6.1.7]
Acylphosphatase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HRZ5_9RHIZ
SCNpilot_cont_750_p_scaffold_4018_14
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9726..10355
DNA (630bp) protein (210aa)
TetR family transcriptional regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I0L6_9RHIZ
TetR family transcriptional regulator {ECO:0000313|EMBL:EHK53483.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
transcriptional regulator
SCNpilot_cont_750_p_scaffold_4018_15
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10348..11232
DNA (885bp) protein (295aa)
isovaleryl-CoA dehydrogenase; K00253 isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
Isovaleryl-CoA dehydrogenase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MI76_9RHIZ
Isovaleryl-CoA dehydrogenase {ECO:0000313|EMBL:EKF20420.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
Displaying 15 items

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