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SCNpilot_cont_750_p_scaffold_4040

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_4040_1
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..347
DNA (345bp) protein (115aa)
long-chain-fatty-acid--CoA ligase; K00666 fatty-acyl-CoA synthase [EC:6.2.1.-]
Fatty-acyl-CoA synthase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HJQ4_9BRAD
Fatty-acyl-CoA synthase {ECO:0000313|EMBL:ERF85058.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
SCNpilot_cont_750_p_scaffold_4040_2
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(453..1253)
DNA (801bp) protein (267aa)
UBA/THIF-type NAD/FAD binding fold protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SWN5_NITWN
UBA/THIF-type NAD/FAD binding fold
UBA/THIF-type NAD/FAD binding fold protein {ECO:0000313|EMBL:ABA03306.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_750_p_scaffold_4040_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1385..2761
DNA (1377bp) protein (459aa)
Peptidoglycan-binding domain 1 n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13EN5_RHOPS
peptidoglycan binding domain-containing protein
Peptidoglycan-binding domain 1 {ECO:0000313|EMBL:ABE37454.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCNpilot_cont_750_p_scaffold_4040_4
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2875..4098)
DNA (1224bp) protein (408aa)
2-octaprenyl-6-methoxyphenyl hydroxylase; K03185 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase {ECO:0000313|EMBL:ABA03347.1}; EC=1.14.13.- {ECO:0000313|EMBL:ABA03347.1};; Flags: Precursor;; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SWJ4_NITWN
SCNpilot_cont_750_p_scaffold_4040_5
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4214..5098
DNA (885bp) protein (295aa)
acyl-CoA thioesterase II; K10805 acyl-CoA thioesterase II [EC:3.1.2.-] rbh
acyl-CoA thioesterase n=1 Tax=Afipia birgiae RepID=UPI00031A712E
Acyl-CoA thioesterase II {ECO:0000313|EMBL:EKS33941.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCNpilot_cont_750_p_scaffold_4040_6
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5240..5578
DNA (339bp) protein (113aa)
Nitrogen regulatory protein PII n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0FY69_9BRAD
Nitrogen regulatory protein PII {ECO:0000313|EMBL:EJZ35948.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
nitrogen regulatory protein PII; K04752 nitrogen regulatory protein P-II 2
SCNpilot_cont_750_p_scaffold_4040_7
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5715..7019
DNA (1305bp) protein (435aa)
ammonia channel protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037AF5CE
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
putative ammonium transporter; K03320 ammonium transporter, Amt family
SCNpilot_cont_750_p_scaffold_4040_8
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7031..7957)
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3HX93_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EJN08651.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_4040_9
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8158..8973)
DNA (816bp) protein (272aa)
exodeoxyribonuclease III (xth); K01142 exodeoxyribonuclease III [EC:3.1.11.2]
exodeoxyribonuclease III n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003178A49
Bradyrhizobium elkanii strain UASWS1015 Contig171, whole genome shotgun sequence {ECO:0000313|EMBL:KIU50123.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
SCNpilot_cont_750_p_scaffold_4040_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9140..9985)
DNA (846bp) protein (282aa)
Outer membrane lipoprotein carrier protein LolA n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21CN4_RHOPB
outer membrane lipoprotein carrier protein LolA
Outer-membrane lipoprotein carrier protein {ECO:0000256|SAAS:SAAS00088851}; Flags: Precursor;; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_cont_750_p_scaffold_4040_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10067..11137)
DNA (1071bp) protein (357aa)
Cell divisionFtsK/SpoIIIE n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J372_RHOP2
cell division protein FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
Cell divisionFtsK/SpoIIIE {ECO:0000313|EMBL:ABD05088.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCNpilot_cont_750_p_scaffold_4040_12
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11131..12114)
DNA (984bp) protein (328aa)
cell division protein FtsK n=1 Tax=Bradyrhizobium elkanii RepID=UPI000371B025
DNA translocase ftsK {ECO:0000313|EMBL:ERF84422.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
ftsK; cell division protein; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
Displaying 12 items

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