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SCNpilot_cont_750_p_scaffold_4147

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_4147_1
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(774..1529)
DNA (756bp) protein (252aa)
UPI0003CFA907 related cluster n=1 Tax=unknown RepID=UPI0003CFA907
Lytic transglycosylase {ECO:0000313|EMBL:ESZ18814.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_4147_2
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1771..2346
DNA (576bp) protein (192aa)
methylated-DNA--protein-cysteine methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000316E490
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000313|EMBL:ESZ18815.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
SCNpilot_cont_750_p_scaffold_4147_3
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2380..2688)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PUX4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCM75190.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_4147_4
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2987..3199
DNA (213bp) protein (71aa)
Cold-shock DNA-binding domain-containing protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPG9_9RHIZ
Cold-shock protein {ECO:0000313|EMBL:KKB13441.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
cold shock protein; K03704 cold shock protein (beta-ribbon, CspA family)
SCNpilot_cont_750_p_scaffold_4147_5
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3448..4356
DNA (909bp) protein (303aa)
3-hydroxyisobutyrate dehydrogenase n=1 Tax=Rhizobium meliloti RepID=UPI0002FEFA74
3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:KJB94799.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
3-hydroxyisobutyrate dehydrogenase rbh
SCNpilot_cont_750_p_scaffold_4147_6
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4383..4832)
DNA (450bp) protein (150aa)
UPI0003CE26A4 related cluster n=1 Tax=unknown RepID=UPI0003CE26A4
Uncharacterized protein {ECO:0000313|EMBL:ESW92488.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_4147_7
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4892..5338
DNA (447bp) protein (149aa)
UPI0003CDE2FD related cluster n=1 Tax=unknown RepID=UPI0003CDE2FD
MarR family transcriptional regulator {ECO:0000313|EMBL:ESW92487.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
MarR family transcriptional regulator
SCNpilot_cont_750_p_scaffold_4147_8
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5360..6451)
DNA (1092bp) protein (364aa)
sn-glycerol-3-phosphate import ATP-binding protein UgpC {ECO:0000256|HAMAP-Rule:MF_01727}; EC=3.6.3.20 {ECO:0000256|HAMAP-Rule:MF_01727};; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
ugpC; glycerol-3-phosphate transporter ATP-binding subunit; K05816 sn-glycerol 3-phosphate transport system ATP-binding protein [EC:3.6.3.20]
Glycerol-3-phosphate transporter ATP-binding subunit n=1 Tax=Nitratireductor indicus C115 RepID=K2PPH8_9RHIZ
SCNpilot_cont_750_p_scaffold_4147_9
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6468..7316)
DNA (849bp) protein (283aa)
Putative sugar ABC transporter (Permease protein) putative glycerol 3-phosphate transport protein, ugpE-like protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J6W3_POLGS
sugar ABC transporter permease; K05815 sn-glycerol 3-phosphate transport system permease protein
Putative sugar ABC transporter (Permease protein) putative glycerol 3-phosphate transport protein, ugpE-like protein {ECO:0000313|EMBL:ADZ72596.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_750_p_scaffold_4147_10
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7324..8208)
DNA (885bp) protein (295aa)
sn-glycerol-3-phosphate ABC transporter, permease protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J6W4_POLGS
Glycerol-3-phosphate transporter permease {ECO:0000313|EMBL:KGD86530.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
sn-glycerol-3-phosphate ABC transporter permease; K05814 sn-glycerol 3-phosphate transport system permease protein
SCNpilot_cont_750_p_scaffold_4147_11
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8280..9605)
DNA (1326bp) protein (442aa)
glycerol-3-phosphate ABC transporter substrate-binding protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI000364E274
ugpBc; sn-glycerol-3-phosphate ABC transporter substrate-binding protein; K05813 sn-glycerol 3-phosphate transport system substrate-binding protein
sn-glycerol-3-phosphate ABC transporter, substrate-binding protein {ECO:0000313|EMBL:ADZ72598.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_750_p_scaffold_4147_12
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9796..10641)
DNA (846bp) protein (282aa)
UPI0003CF7D0B related cluster n=1 Tax=unknown RepID=UPI0003CF7D0B
Diguanylate phosphodiesterase {ECO:0000313|EMBL:ESY76844.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
diguanylate phosphodiesterase
SCNpilot_cont_750_p_scaffold_4147_13
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10830..11006
DNA (177bp) protein (59aa)
aspartate aminotransferase; K00812 aspartate aminotransferase [EC:2.6.1.1]
Aspartate/tyrosine/aromatic aminotransferase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0W411_RHILT
Aspartate/tyrosine/aromatic aminotransferase {ECO:0000313|EMBL:EJC80471.1}; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2297.;"
Displaying 13 items

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