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SCNpilot_cont_750_p_scaffold_4414

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_4414_1
Thioclava sp. 13D2W-2, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..724)
DNA (723bp) protein (241aa)
Periplasmic binding protein n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9S7L8_9RHOB
Periplasmic binding protein {ECO:0000313|EMBL:KFE36372.1}; TaxID=1317124 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. 13D2W-2.;"
substrate-binding protein; K02016 iron complex transport system substrate-binding protein
SCNpilot_cont_750_p_scaffold_4414_2
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(731..1603)
DNA (873bp) protein (291aa)
aldose 1-epimerase n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI00037DFA08
aldose 1-epimerase
Aldose 1-epimerase {ECO:0000313|EMBL:ACA17594.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_cont_750_p_scaffold_4414_3
Loktanella vestfoldensis, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1679..2356)
DNA (678bp) protein (226aa)
Regulatory protein GntR, HTH:GntR, C-terminal n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V736_9RHOB
Regulatory protein GntR, HTH:GntR, C-terminal {ECO:0000313|EMBL:EAQ06052.1}; TaxID=314232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktanella vestfoldensis SKA53.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_4414_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

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2500..3495
DNA (996bp) protein (332aa)
TRAP transporter solute receptor n=1 Tax=Rhodovulum sp. PH10 RepID=J6IWW5_9RHOB
extracellular solute-binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
SCNpilot_cont_750_p_scaffold_4414_5
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3766..4305
DNA (540bp) protein (180aa)
TRAP dicarboxylate transporter, DctQ subunit n=1 Tax=Rhodovulum sp. PH10 RepID=J6L8K7_9RHOB
tripartite ATP-independent periplasmic transporter DctQ
Tax=RBG_16_Betaproteobacteria_64_18_curated
SCNpilot_cont_750_p_scaffold_4414_6
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4302..5618
DNA (1317bp) protein (439aa)
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6B5_9BRAD
dctM2; TRAP dicarboxylate transporter subunit DctM rbh
Tax=RBG_16_Betaproteobacteria_64_18_curated
SCNpilot_cont_750_p_scaffold_4414_7
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5615..6961
DNA (1347bp) protein (449aa)
hypothetical protein; K01578 malonyl-CoA decarboxylase [EC:4.1.1.9] rbh
Uncharacterized protein n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4WYH2_RHOS5
Putative decarboxylase {ECO:0000313|EMBL:CDX51610.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
SCNpilot_cont_750_p_scaffold_4414_8
Roseovarius nubinhibens, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6942..8459
DNA (1518bp) protein (506aa)
Malonyl-CoA synthase n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SJF9_9RHOB
Malonyl-CoA synthase {ECO:0000313|EMBL:EAP77490.1}; TaxID=89187 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius nubinhibens ISM.;"
malonyl-CoA synthase
SCNpilot_cont_750_p_scaffold_4414_9
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8576..8923
DNA (348bp) protein (116aa)
Endoribonuclease L-PSP n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J5J3_POLGS
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ADZ72363.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_750_p_scaffold_4414_10
Gammaproteobacteria bacterium MFB021, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8935..9870
DNA (936bp) protein (312aa)
ornithine cyclodeaminase/mu-crystallin; K01750 ornithine cyclodeaminase [EC:4.3.1.12] rbh
ornithine cyclodeaminase n=1 Tax=Paracoccus sp. N5 RepID=UPI0003762804
Ornithine cyclodeaminase {ECO:0000313|EMBL:KFF49402.1}; TaxID=1492922 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MFB021.;"
SCNpilot_cont_750_p_scaffold_4414_11
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9897..10463
DNA (567bp) protein (189aa)
acetylpolyamine aminohydrolase n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI0003A1EBD3
Acetylpolyamine aminohydrolase AphA {ECO:0000313|EMBL:EYR77402.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
histone deacetylase superfamily protein
Displaying 11 items

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