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SCNpilot_cont_750_p_scaffold_4440

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_4440_1
unknown

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2..193
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_4440_2
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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299..1408
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Advenella kashmirensis W13003 RepID=V8QXJ1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:ETF04631.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
FAD dependent oxidoreductase
SCNpilot_cont_750_p_scaffold_4440_3
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1401..1706
DNA (306bp) protein (102aa)
Sarcosine oxidase n=1 Tax=Advenella kashmirensis W13003 RepID=V8QV30_9BURK
Sarcosine oxidase {ECO:0000313|EMBL:ETF03801.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_4440_4
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1703..3121
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=Advenella kashmirensis W13003 RepID=V8QYC4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:ETF04632.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
oxidase
SCNpilot_cont_750_p_scaffold_4440_5
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3118..4578
DNA (1461bp) protein (487aa)
Aldehyde dehydrogenase n=1 Tax=Advenella kashmirensis W13003 RepID=V8QVX1_9BURK
Aldehyde dehydrogenase {ECO:0000313|EMBL:ETF03802.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
aldehyde dehydrogenase
SCNpilot_cont_750_p_scaffold_4440_6
Aliivibrio fischeri, Aliivibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4642..5538)
DNA (897bp) protein (299aa)
Glycine cleavage system transcriptional activator n=3 Tax=Aliivibrio fischeri RepID=B5FAT4_VIBFM
DNA-binding transcriptional activator GcvA; K03566 LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Glycine cleavage system transcriptional activator {ECO:0000313|EMBL:ACH67072.1}; TaxID=388396 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Aliivibrio.;" source="Vibrio fischeri (strain MJ11).;"
SCNpilot_cont_750_p_scaffold_4440_7
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5767..6807
DNA (1041bp) protein (347aa)
Putative cyclase n=1 Tax=Rhodovulum sp. PH10 RepID=J5PKP3_9RHOB
Cyclase {ECO:0000313|EMBL:KJB92467.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
cyclase family protein
SCNpilot_cont_750_p_scaffold_4440_8
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7044..7850
DNA (807bp) protein (269aa)
Periplasmic component of amino acid ABC-type transporter/signal transduction system n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IXB9_9BURK
Periplasmic component of amino acid ABC-type transporter/signal transduction system {ECO:0000313|EMBL:EIF35371.1}; Flags: Precursor;; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. Ch1-1.;"
amino acid ABC transporter
SCNpilot_cont_750_p_scaffold_4440_9
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7908..8582
DNA (675bp) protein (225aa)
polar amino acid ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI00036605D9
occQe; octopine ABC transporter; K02029 polar amino acid transport system permease protein
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family {ECO:0000313|EMBL:EJK87996.1}; Flags: Precursor;; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
SCNpilot_cont_750_p_scaffold_4440_10
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8582..9274
DNA (693bp) protein (231aa)
Amino acid ABC transporter permease protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I8M3_AZOC5
amino acid ABC transporter permease
Amino acid ABC transporter permease protein {ECO:0000313|EMBL:BAF88678.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_750_p_scaffold_4440_11
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9246..9983
DNA (738bp) protein (246aa)
ABC transporter n=1 Tax=Variovorax paradoxus RepID=UPI000380E285
ABC transporter-like protein rbh
Amino acid ABC transporter ATP-binding protein, PAAT family {ECO:0000313|EMBL:ABE42652.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
SCNpilot_cont_750_p_scaffold_4440_12
Rhizobium nepotum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10038..10172
DNA (135bp) protein (45aa)
Cro/Cl family transcriptional regulator n=1 Tax=Agrobacterium sp. 224MFTsu3.1 RepID=UPI000382E844
conserved hypothetical protein; putative transcriptional regulatory protein HTH type
Cro/Cl family transcriptional regulator {ECO:0000313|EMBL:KJF66796.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;"
Displaying 12 items

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