ggKbase home page

SCNpilot_cont_750_p_scaffold_4532

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_4532_1
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..332
DNA (330bp) protein (110aa)
ATP synthase F1 subunit alpha (EC:3.6.3.14); K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14]
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
ATP synthase subunit alpha n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VH97_CAUST
SCNpilot_cont_750_p_scaffold_4532_2
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

348..1208
DNA (861bp) protein (287aa)
atpG; ATP synthase F0F1 subunit gamma; K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14]
ATP synthase gamma chain n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=ATPG_PHEZH
ATP synthase gamma chain {ECO:0000255|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000255|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000255|HAMAP-Rule:MF_00815}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCNpilot_cont_750_p_scaffold_4532_3
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1228..2700
DNA (1473bp) protein (491aa)
atpD; ATP synthase F0F1 subunit beta; K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14] rbh
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
ATP synthase subunit beta n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RD47_PHEZH
SCNpilot_cont_750_p_scaffold_4532_4
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2704..3102
DNA (399bp) protein (133aa)
atpC; F0F1 ATP synthase subunit epsilon; K02114 F-type H+-transporting ATPase subunit epsilon [EC:3.6.3.14]
ATP synthase epsilon chain n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IH33_XANP2
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530, ECO:0000313|EMBL:CDO59458.1}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
SCNpilot_cont_750_p_scaffold_4532_5
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3077..4471)
DNA (1395bp) protein (465aa)
apolipoprotein N-acyltransferase; K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-]
Apolipoprotein N-acyltransferase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UZS2_9RHIZ
Apolipoprotein N-acyltransferase {ECO:0000313|EMBL:ENN87115.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
SCNpilot_cont_750_p_scaffold_4532_6
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4468..5052)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC460 RepID=V4PMA6_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:KGF79629.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
TetR family transcriptional regulator
SCNpilot_cont_750_p_scaffold_4532_7
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5206..6045
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HT54_PARL1
Conserved protein {ECO:0000313|EMBL:GAK44314.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
hypothetical protein rbh
SCNpilot_cont_750_p_scaffold_4532_8
unknown

Not on your lists

6096..6437
DNA (342bp) protein (114aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_4532_9
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6434..7060)
DNA (627bp) protein (209aa)
carbonic anhydrase; K01673 carbonic anhydrase [EC:4.2.1.1]
Carbonic anhydrase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I9B1_AZOC5
Carbonate dehydratase {ECO:0000313|EMBL:KGM30284.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
SCNpilot_cont_750_p_scaffold_4532_10
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7063..7857)
DNA (795bp) protein (265aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
succinate dehydrogenase and fumarate reductase iron-sulfur protein (EC:1.3.5.1); K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1]
succinate dehydrogenase iron-sulfur subunit n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F32236
SCNpilot_cont_750_p_scaffold_4532_11
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8029..9729)
DNA (1701bp) protein (567aa)
Heparinase II/III family protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HSQ8_PARL1
Heparinase II/III family protein {ECO:0000313|EMBL:GAK43653.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
heparinase II/III family protein
SCNpilot_cont_750_p_scaffold_4532_12
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9889..10194)
DNA (306bp) protein (102aa)
pentose-5-phosphate-3-epimerase; K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1]
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis (strain HTCC2594).;"
Ribulose-phosphate 3-epimerase n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N6T9_ERYLH
Displaying 12 items

View Taxonomy