ggKbase home page

SCNpilot_cont_750_p_scaffold_4764

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_4764_1
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

214..648
DNA (435bp) protein (145aa)
Single-stranded DNA-binding protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK20_OLICO
putative single-stranded DNA-binding protein
Putative single-stranded DNA-binding protein {ECO:0000313|EMBL:AEI08204.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_750_p_scaffold_4764_2
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(733..1218)
DNA (486bp) protein (162aa)
Putative transcriptional regulator n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QF96_NITHX
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:CEG10455.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
SCNpilot_cont_750_p_scaffold_4764_3
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1215..1526)
DNA (312bp) protein (104aa)
Helix-turn-helix domain protein n=2 Tax=Oligotropha carboxidovorans RepID=F8BQW2_OLICM
Bradyrhizobium elkanii strain UASWS1015 Contig124, whole genome shotgun sequence {ECO:0000313|EMBL:KIU54037.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
helix-turn-helix domain-containing protein
SCNpilot_cont_750_p_scaffold_4764_4
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1838..3067
DNA (1230bp) protein (410aa)
RepC-like protein n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CBT9_METED
Replication initiation protein RepC {ECO:0000313|EMBL:CEG10456.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
RepC-like protein rbh
SCNpilot_cont_750_p_scaffold_4764_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3152..3565)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFW9_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64878.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_p_scaffold_4764_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3562..4323)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NEP9_AFIFE
Chromosome partitioning protein {ECO:0000313|EMBL:KIZ48197.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
cobyrinic acid a,c-diamide synthase
SCNpilot_cont_750_p_scaffold_4764_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4750..5175
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QF91_NITHX
Uncharacterized protein {ECO:0000313|EMBL:KIZ48198.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_4764_8
Streptomyces sp. AcH 505, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5172..7484
DNA (2313bp) protein (771aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002DE3629
Uncharacterized protein {ECO:0000313|EMBL:KIF65904.1}; TaxID=352211 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AcH 505.;"
hypothetical protein rbh
SCNpilot_cont_750_p_scaffold_4764_9
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7830..8561)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NRK5_9BRAD
Transcriptional activator protein LuxR {ECO:0000313|EMBL:CEG10518.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
LuxR family transcriptional regulator
SCNpilot_cont_750_p_scaffold_4764_10
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8674..9069)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E1747A
Cytochrome c2 {ECO:0000313|EMBL:EKS42563.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
cycA; cytochrome c550; K08738 cytochrome c
SCNpilot_cont_750_p_scaffold_4764_11
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9090..10052)
DNA (963bp) protein (321aa)
MoeA-like molybdopterin cofactor biosynthesis protein; K03750 molybdopterin molybdotransferase [EC:2.10.1.1]
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0003172C87
Molybdopterin biosynthesis enzyme {ECO:0000313|EMBL:EIG62867.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
Displaying 11 items

View Taxonomy