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SCNpilot_cont_750_p_scaffold_3021

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_3021_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..230
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW29_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91420.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_3021_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(309..3419)
DNA (3111bp) protein (1037aa)
hypothetical protein; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] rbh
Type I restriction-modification deoxyribonuclease, r subunit n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIS3_9GAMM
Type I restriction-modification deoxyribonuclease, r subunit {ECO:0000313|EMBL:EIL99364.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_cont_750_p_scaffold_3021_3
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3416..3802)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPD2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89073.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_3021_4
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3771..4442)
DNA (672bp) protein (224aa)
DNA polymerase subunit beta n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPD1_9GAMM
DNA polymerase subunit beta {ECO:0000313|EMBL:EIL89072.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
DNA polymerase subunit beta
SCNpilot_cont_750_p_scaffold_3021_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4505..5434)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPC9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89070.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein rbh
SCNpilot_cont_750_p_scaffold_3021_6
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5721..7064)
DNA (1344bp) protein (448aa)
type I restriction enzyme EcoKI specificity protein; K01154 type I restriction enzyme, S subunit [EC:3.1.21.3] rbh
Type I site-specific deoxyribonuclease n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPC7_9GAMM
Type I site-specific deoxyribonuclease {ECO:0000313|EMBL:EIL89068.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
SCNpilot_cont_750_p_scaffold_3021_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7061..8899)
DNA (1839bp) protein (613aa)
type I restriction-modification methylase m subunit, n-6 DNA methylase (EC:2.1.1.72); K03427 type I restriction enzyme M protein [EC:2.1.1.72] rbh
Site-specific DNA-methyltransferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPC5_9GAMM
Site-specific DNA-methyltransferase {ECO:0000313|EMBL:EIL89066.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
SCNpilot_cont_750_p_scaffold_3021_8
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8970..10244)
DNA (1275bp) protein (425aa)
HipA protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VRT9_9GAMM
HipA protein {ECO:0000313|EMBL:EIL89930.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
HipA-like protein
SCNpilot_cont_750_p_scaffold_3021_9
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10241..10489)
DNA (249bp) protein (83aa)
XRE family transcriptional regulator n=1 Tax=Rhodanobacter sp. 115 RepID=I4VRT8_9GAMM
XRE family transcriptional regulator {ECO:0000313|EMBL:EIL89929.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_3021_10
unknown

Not on your lists

10576..10833
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_3021_11
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10710..11336)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NFA6_9GAMM
hypothetical protein rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_750_p_scaffold_3021_trna_1
unknown

Not on your lists

comp(11494..11580)
DNA (87bp)
transferRNA
SCNpilot_cont_750_p_scaffold_3021_12
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11630..12013)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WA43_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_750_p_scaffold_3021_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12010..13290)
DNA (1281bp) protein (427aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
seryl-tRNA synthetase; K01875 seryl-tRNA synthetase [EC:6.1.1.11]
Serine--tRNA ligase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W737_9GAMM
SCNpilot_cont_750_p_scaffold_3021_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13382..13936)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WXB7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89278.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 15 items

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