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SCNpilot_cont_750_p_scaffold_3031

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_3031_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(168..665)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WK21_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL99812.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_3031_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(845..2287)
DNA (1443bp) protein (481aa)
Phospholipase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WK20_9GAMM
Phospholipase {ECO:0000313|EMBL:EIL99811.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_3031_3
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2420..3175
DNA (756bp) protein (252aa)
Lipoprotein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W115_9GAMM
Lipoprotein {ECO:0000313|EMBL:EIL93156.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
lipoprotein transmembrane
SCNpilot_cont_750_p_scaffold_3031_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3226..4656)
DNA (1431bp) protein (477aa)
Aldehyde dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W711_9GAMM
Aldehyde dehydrogenase {ECO:0000313|EMBL:EIL95252.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
NAD-dependent aldehyde dehydrogenase
SCNpilot_cont_750_p_scaffold_3031_5
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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4938..6734
DNA (1797bp) protein (599aa)
thiamine pyrophosphate protein (EC:1.2.2.2); K00156 pyruvate dehydrogenase (quinone) [EC:1.2.5.1] rbh
Pyruvate oxidase {ECO:0000313|EMBL:ABA56994.1}; EC=2.2.1.6 {ECO:0000313|EMBL:ABA56994.1};; TaxID=323261 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848).;"
Pyruvate oxidase n=2 Tax=Nitrosococcus oceani RepID=Q3JDV2_NITOC
SCNpilot_cont_750_p_scaffold_3031_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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6745..7827
DNA (1083bp) protein (361aa)
Putative racemase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FVH9_SORC5
racemase
Putative racemase {ECO:0000313|EMBL:CAN92278.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCNpilot_cont_750_p_scaffold_3031_7
unknown

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7865..8062
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_3031_8
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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8059..11019
DNA (2961bp) protein (987aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI00036EED35
FAD linked oxidase domain protein {ECO:0000313|EMBL:CCF82967.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
FAD linked oxidase; K06911 rbh
SCNpilot_cont_750_p_scaffold_3031_9
Rhodopirellula maiorica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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11016..12089
DNA (1074bp) protein (358aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhodopirellula maiorica SM1 RepID=M5S6M0_9PLAN
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EMI21824.1}; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;"
short chain dehydrogenase rbh
SCNpilot_cont_750_p_scaffold_3031_10
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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12086..12463
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WIU0_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ20330.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
SCNpilot_cont_750_p_scaffold_3031_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12585..13880)
DNA (1296bp) protein (432aa)
Exodeoxyribonuclease VII large subunit (EC:3.1.11.6) rbh
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Exodeoxyribonuclease 7 large subunit n=1 Tax=Rhodanobacter denitrificans RepID=M4NEN3_9GAMM
Displaying 11 items

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