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SCNpilot_cont_750_p_scaffold_3060

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_3060_1
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3..263
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TF08_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK73282.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_3060_2
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(385..1233)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T719_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK73283.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein rbh
SCNpilot_cont_750_p_scaffold_3060_3
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1250..2950)
DNA (1701bp) protein (567aa)
Mobilisation protein n=1 Tax=Arthrobacter arilaitensis (strain DSM 16368 / CIP 108037 / JCM 13566 / Re117) RepID=E1VRH2_ARTAR
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:KJL40890.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
mobilisation protein rbh
SCNpilot_cont_750_p_scaffold_3060_4
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2947..3366)
DNA (420bp) protein (140aa)
Tat pathway signal sequence domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RWZ6_LEIAQ
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:ERK73286.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
mobilisation protein
SCNpilot_cont_750_p_scaffold_3060_5
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3620..3991
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TF13_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK73287.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_3060_6
unknown

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4247..4339
DNA (93bp) protein (31aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_3060_7
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4321..4536
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T725_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK73288.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_cont_750_p_scaffold_3060_8
unknown

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comp(4533..5105)
DNA (573bp) protein (191aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_3060_9
Arthrobacter arilaitensis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5102..5698)
DNA (597bp) protein (199aa)
Putative resolvase n=1 Tax=Arthrobacter arilaitensis (strain DSM 16368 / CIP 108037 / JCM 13566 / Re117) RepID=E1VRG0_ARTAR
putative resolvase rbh
Putative resolvase {ECO:0000313|EMBL:CBQ74060.1}; TaxID=861360 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter arilaitensis (strain DSM 16368 / CIP 108037 / JCM 13566 /; Re117).;"
SCNpilot_cont_750_p_scaffold_3060_10
Propionibacterium freudenreichii, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5695..5910)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Propionibacterium acidifaciens F0233 RepID=U2QDR5_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:CEP25559.1}; TaxID=66712 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freudenreichii subsp. freudenreichii.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_3060_11
Propionibacterium freudenreichii, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5907..6740)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) RepID=B0RIT1_CLAMS
Cell filamentation protein {ECO:0000313|EMBL:CEP25558.1}; TaxID=66712 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freudenreichii subsp. freudenreichii.;"
hypothetical protein rbh
SCNpilot_cont_750_p_scaffold_3060_12
Propionibacterium freudenreichii, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6740..6937)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=A5CUG8_CLAM3
Uncharacterized protein {ECO:0000313|EMBL:CEP25557.1}; TaxID=66712 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freudenreichii subsp. freudenreichii.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_3060_13
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7113..7925)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AQB3_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD84347.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein; K07132
SCNpilot_cont_750_p_scaffold_3060_14
Rhodococcus ruber, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7922..9310)
DNA (1389bp) protein (463aa)
Transposase n=2 Tax=Rhodococcus RepID=M2YR50_9NOCA
Transposase {ECO:0000313|EMBL:EME51258.1}; TaxID=1278076 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus ruber BKS 20-38.;"
putative transposase; K07497 putative transposase
SCNpilot_cont_750_p_scaffold_3060_15
Dietzia sp. UCD-THP, Dietzia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9312..9950)
DNA (639bp) protein (213aa)
DNA invertase n=1 Tax=Dietzia sp. UCD-THP RepID=UPI00037FD31E
Invertase {ECO:0000313|EMBL:EYT50909.1}; TaxID=1292020 species="Bacteria; Actinobacteria; Corynebacteriales; Dietziaceae; Dietzia.;" source="Dietzia sp. UCD-THP.;"
site-specific recombinase, DNA invertase Pin
SCNpilot_cont_750_p_scaffold_3060_16
Arthrobacter arilaitensis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10353..13382
DNA (3030bp) protein (1010aa)
UPI0003C7E89F related cluster n=1 Tax=unknown RepID=UPI0003C7E89F
hypothetical protein
Hypothetical membrane protein {ECO:0000313|EMBL:CBT77429.1}; TaxID=861360 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter arilaitensis (strain DSM 16368 / CIP 108037 / JCM 13566 /; Re117).;"
Displaying 16 items

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