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SCNpilot_cont_750_p_scaffold_3240

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_3240_1
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..340)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VL51_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87942.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
RES domain-containing protein
SCNpilot_cont_750_p_scaffold_3240_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(489..893)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NA19_9GAMM
Protein of unknown function (DUF2384)
Uncharacterized protein {ECO:0000313|EMBL:AGG87220.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_p_scaffold_3240_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(974..2773)
DNA (1800bp) protein (600aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU80_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90771.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein rbh
SCNpilot_cont_750_p_scaffold_3240_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2882..3586)
DNA (705bp) protein (235aa)
Putative transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=M4NCR5_9GAMM
putative transcriptional regulator rbh
Putative transcriptional regulator {ECO:0000313|EMBL:AGG87218.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_p_scaffold_3240_5
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3679..4308)
DNA (630bp) protein (210aa)
Glutathione S-transferase domain-containing protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VL55_9GAMM
glutathione S-transferase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_750_p_scaffold_3240_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4343..4579)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU84_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90775.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_3240_7
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4591..5199)
DNA (609bp) protein (203aa)
thiazole biosynthesis protein ThiJ n=1 Tax=Dyella ginsengisoli RepID=UPI0003474758
transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_750_p_scaffold_3240_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5430..6443
DNA (1014bp) protein (338aa)
Fructose-1,6-bisphosphatase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; Short=FBPase class 1 {ECO:0000256|HAMAP-Rule:MF_01855};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01855};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
fructose-1,6-bisphosphatase (EC:3.1.3.11)
Fructose-1,6-bisphosphatase class 1 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU86_9GAMM
SCNpilot_cont_750_p_scaffold_3240_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6633..8690
DNA (2058bp) protein (686aa)
Dipeptidyl aminopeptidase/acylaminoacyl peptidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU88_9GAMM
Dipeptidyl aminopeptidase/acylaminoacyl peptidase {ECO:0000313|EMBL:EIL90779.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
dipeptidyl aminopeptidase/acylaminoacyl peptidase rbh
SCNpilot_cont_750_p_scaffold_3240_10
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8735..8914)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VL67_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87958.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_3240_11
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9054..10757
DNA (1704bp) protein (568aa)
Ubiquinone biosynthesis protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VL68_9GAMM
Ubiquinone biosynthesis protein {ECO:0000313|EMBL:EIL87959.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
ABC-1 domain-containing protein rbh
SCNpilot_cont_750_p_scaffold_3240_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10804..11919)
DNA (1116bp) protein (372aa)
DNA repair photolyase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU93_9GAMM
DNA repair photolyase {ECO:0000313|EMBL:EIL90784.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA repair photolyase
SCNpilot_cont_750_p_scaffold_3240_13
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12038..12298
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VL82_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87973.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Transglycosylase associated protein
SCNpilot_cont_750_p_scaffold_3240_14
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12360..13133)
DNA (774bp) protein (258aa)
Sugar transport protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VL83_9GAMM
Sugar transport protein {ECO:0000313|EMBL:EIL87974.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
arabinose efflux permease family protein
Displaying 14 items

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