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SCNpilot_cont_750_p_scaffold_3267

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_3267_1
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..417)
DNA (417bp) protein (139aa)
Urease accessory protein UreG n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JUH4_HYPDA
urease accessory protein UreG; K03189 urease accessory protein
Urease accessory protein UreG {ECO:0000256|HAMAP-Rule:MF_01389}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_cont_750_p_scaffold_3267_2
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(421..2133)
DNA (1713bp) protein (571aa)
Urease subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_01953, ECO:0000256|SAAS:SAAS00033844};; Urea amidohydrolase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
urease subunit alpha (EC:3.5.1.5); K01428 urease subunit alpha [EC:3.5.1.5] rbh
Urease subunit alpha n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JUH5_HYPDA
SCNpilot_cont_750_p_scaffold_3267_3
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2146..2841)
DNA (696bp) protein (232aa)
urease subunit gamma (EC:3.5.1.5); K14048 urease subunit gamma/beta [EC:3.5.1.5] rbh
Urease {ECO:0000256|SAAS:SAAS00108089}; EC=3.5.1.5 {ECO:0000256|SAAS:SAAS00108089};; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
Urease, gamma subunit n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JUH6_HYPDA
SCNpilot_cont_750_p_scaffold_3267_4
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2868..3554)
DNA (687bp) protein (229aa)
Urease accessory protein UreF n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JUH7_HYPDA
urease accessory protein UreF; K03188 urease accessory protein
Urease accessory protein UreF {ECO:0000256|HAMAP-Rule:MF_01385}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_cont_750_p_scaffold_3267_5
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3551..4003)
DNA (453bp) protein (151aa)
Urease accessory protein UreE n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J6C7_HYPSM
ureE; Urease accessory protein ureE 1; K03187 urease accessory protein
Urease accessory protein UreE {ECO:0000256|HAMAP-Rule:MF_00822, ECO:0000256|SAAS:SAAS00072411}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_cont_750_p_scaffold_3267_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4478..4993
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QM45_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62702.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_p_scaffold_3267_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5004..5861
DNA (858bp) protein (286aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
succinate dehydrogenase and fumarate reductase iron-sulfur protein (EC:1.3.5.1); K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1]
Succinate dehydrogenase iron-sulfur subunit n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE66_9GAMM
SCNpilot_cont_750_p_scaffold_3267_8
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5871..6266
DNA (396bp) protein (132aa)
succinate dehydrogenase subunit C (EC:1.3.5.1); K00241 succinate dehydrogenase cytochrome b556 subunit
succinate dehydrogenase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B2F038
Succinate dehydrogenase {ECO:0000313|EMBL:EWY40242.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
SCNpilot_cont_750_p_scaffold_3267_9
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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6277..6675
DNA (399bp) protein (133aa)
Succinate dehydrogenase hydrophobic membrane anchor protein n=1 Tax=Caenispirillum salinarum AK4 RepID=K9H2Y8_9PROT
Putative Succinate dehydrogenase, hydrophobic membrane anchor protein {ECO:0000313|EMBL:CDH45257.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
succinate dehydrogenase, cytochrome b subunit; K00242 succinate dehydrogenase membrane anchor subunit
SCNpilot_cont_750_p_scaffold_3267_10
unknown

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comp(6558..6860)
DNA (303bp) protein (101aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_3267_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6946..8919)
DNA (1974bp) protein (658aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q132V5_RHOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE40884.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCNpilot_cont_750_p_scaffold_3267_12
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8916..9908)
DNA (993bp) protein (331aa)
Blr2299 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89SV1_BRADU
hypothetical protein
Blr2299 protein {ECO:0000313|EMBL:BAC47564.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
SCNpilot_cont_750_p_scaffold_3267_13
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9921..13064)
DNA (3144bp) protein (1048aa)
Integrase, catalytic region n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q132V7_RHOPS
integrase catalytic subunit rbh
Integrase, catalytic region {ECO:0000313|EMBL:ABE40882.1}; Flags: Precursor;; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
Displaying 13 items

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