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SCNpilot_cont_750_p_scaffold_3549

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_3549_1
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1287
DNA (1287bp) protein (429aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000255|HAMAP-Rule:MF_01864}; EC=2.8.4.3 {ECO:0000255|HAMAP-Rule:MF_01864};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000255|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000255|HAMAP-Rule:MF_01864}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=MIAB_MESSB
(dimethylallyl)adenosine tRNA methylthiotransferase; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA
SCNpilot_cont_750_p_scaffold_3549_2
Brucella neotomae, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1298..2332
DNA (1035bp) protein (345aa)
PhoH family protein n=2 Tax=Brucella RepID=D1CUR0_9RHIZ
PhoH family protein {ECO:0000313|EMBL:EEY03569.1}; TaxID=520456 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella neotomae 5K33.;"
PhoH family protein; K06217 phosphate starvation-inducible protein PhoH and related proteins
SCNpilot_cont_750_p_scaffold_3549_3
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2329..2829
DNA (501bp) protein (167aa)
Endoribonuclease YbeY {ECO:0000255|HAMAP-Rule:MF_00009}; EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_00009};; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
Endoribonuclease YbeY n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=YBEY_OCHA4
hypothetical protein; K07042 probable rRNA maturation factor
SCNpilot_cont_750_p_scaffold_3549_4
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2832..4001
DNA (1170bp) protein (390aa)
Hemolysin C n=2 Tax=Ochrobactrum intermedium RepID=C4WEK4_9RHIZ
Hemolysin C {ECO:0000313|EMBL:EEQ97040.1}; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_3549_5
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4208..5803
DNA (1596bp) protein (532aa)
lnt; apolipoprotein N-acyltransferase; K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-]
Apolipoprotein N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148, ECO:0000256|SAAS:SAAS00250216}; Short=ALP N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148};; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_01148, ECO:0000256|SAAS:SAAS00088950};; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
apolipoprotein N-acyltransferase n=1 Tax=Ochrobactrum anthropi RepID=UPI000287D9ED
SCNpilot_cont_750_p_scaffold_3549_6
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5949..6362
DNA (414bp) protein (138aa)
Putative transcriptional regulator n=1 Tax=Rhizobium sp. CF080 RepID=J2JF39_9RHIZ
Cro/Cl family transcriptional regulator {ECO:0000313|EMBL:KGD86457.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
HTH-type transcriptional regulator R00410
SCNpilot_cont_750_p_scaffold_3549_7
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6642..7934
DNA (1293bp) protein (431aa)
S-adenosylmethionine synthase {ECO:0000256|RuleBase:RU000541}; EC=2.5.1.6 {ECO:0000256|RuleBase:RU000541};; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
S-adenosylmethionine synthetase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6]
S-adenosylmethionine synthetase n=1 Tax=Hoeflea sp. 108 RepID=UPI00036C6129
SCNpilot_cont_750_p_scaffold_3549_8
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8029..8727
DNA (699bp) protein (233aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
putative methyltransferase; K03439 tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
UPI0003CFEEF0 related cluster n=1 Tax=unknown RepID=UPI0003CFEEF0
SCNpilot_cont_750_p_scaffold_3549_9
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8918..9538
DNA (621bp) protein (207aa)
Ribosome maturation factor RimP n=1 Tax=Phyllobacterium sp. YR531 RepID=J3CGC7_9RHIZ
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
hypothetical protein; K09748 ribosome maturation factor RimP
SCNpilot_cont_750_p_scaffold_3549_10
Brucella melitensis, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9582..11186
DNA (1605bp) protein (535aa)
N utilization substance protein A n=199 Tax=Brucella RepID=A5VTB0_BRUO2
transcription termination factor NusA; K02600 N utilization substance protein A
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=224914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094).;"
SCNpilot_cont_750_p_scaffold_3549_11
Ochrobactrum sp. EGD-AQ16, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11242..11895
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1XDM0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ERI13055.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
hypothetical protein; K07742 hypothetical protein
SCNpilot_cont_750_p_scaffold_3549_12
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11892..12335
DNA (444bp) protein (148aa)
Translation initiation factor IF-2 n=1 Tax=Nitratireductor indicus C115 RepID=K2NYN1_9RHIZ
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
infB; translation initiation factor IF-2; K02519 translation initiation factor IF-2
Displaying 12 items

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