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SCNpilot_cont_750_p_scaffold_3560

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_3560_1
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..874)
DNA (873bp) protein (291aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4L9_9BRAD
Nickel and cobalt resistance protein CnrA {ECO:0000313|EMBL:CEG06646.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
cnrA; RND divalent metal cation efflux transporter CnrA; K15726 cobalt-zinc-cadmium resistance protein CzcA
SCNpilot_cont_750_p_scaffold_3560_2
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(878..2095)
DNA (1218bp) protein (406aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4L8_9BRAD
Cation efflux system protein CzcB {ECO:0000313|EMBL:CEG06647.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
secretion protein HlyD; K15727 cobalt-zinc-cadmium resistance protein CzcB
SCNpilot_cont_750_p_scaffold_3560_3
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2130..2408)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4L7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI52897.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein; K07807 hypothetical protein NreA
SCNpilot_cont_750_p_scaffold_3560_4
unknown

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comp(2469..2744)
DNA (276bp) protein (92aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_3560_5
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2769..4046
DNA (1278bp) protein (426aa)
Cation diffusion facilitator family transporter n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4L5_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig156, whole genome shotgun sequence {ECO:0000313|EMBL:KIU52668.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
cation diffusion facilitator family transporter
SCNpilot_cont_750_p_scaffold_3560_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4909..6255)
DNA (1347bp) protein (449aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
integral membrane sensor signal transduction histidine kinase; K07645 two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000381EC8D
SCNpilot_cont_750_p_scaffold_3560_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6252..6917)
DNA (666bp) protein (222aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IE82_XANP2
Transcriptional regulator {ECO:0000313|EMBL:KIZ34115.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
two component transcriptional regulator
SCNpilot_cont_750_p_scaffold_3560_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7019..8845
DNA (1827bp) protein (609aa)
Cytochrome c biogenesis protein, transmembrane region n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20WQ7_RHOPB
Uncharacterized protein {ECO:0000313|EMBL:KIZ41889.1}; Flags: Fragment;; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
cytochrome c biogenesis protein, transmembrane region
SCNpilot_cont_750_p_scaffold_3560_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8873..9511
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NV04_AFIFE
DSBA oxidoreductase {ECO:0000313|EMBL:KIZ41890.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
thioredoxin domain-containing protein
SCNpilot_cont_750_p_scaffold_3560_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9659..10198
DNA (540bp) protein (180aa)
ErfK/YbiS/YcfS/YnhG n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20WQ5_RHOPB
Uncharacterized protein {ECO:0000313|EMBL:KIZ41891.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_3560_11
unknown

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10246..10494
DNA (249bp) protein (83aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_3560_12
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10431..11087)
DNA (657bp) protein (219aa)
Blr7895 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89CA2_BRADU
hypothetical protein
Blr7895 protein {ECO:0000313|EMBL:BAC53160.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
SCNpilot_cont_750_p_scaffold_3560_13
unknown

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11680..12261
DNA (582bp) protein (194aa)

This feature has no annotations

Displaying 13 items

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