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SCNpilot_cont_750_p_scaffold_3847

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_3847_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..245
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NDS3_9GAMM
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88920.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_p_scaffold_3847_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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365..1066
DNA (702bp) protein (234aa)
Pirin-related protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NMJ7_9GAMM
Pirin-related protein
Pirin-related protein {ECO:0000313|EMBL:AGG88921.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_p_scaffold_3847_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1210..2286
DNA (1077bp) protein (359aa)
O6-methylguanine-DNA methyltransferase/Ada regulatory protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIB4_9GAMM
O6-methylguanine-DNA methyltransferase/Ada regulatory protein {ECO:0000313|EMBL:EIL99205.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
O-6-methylguanine DNA methyltransferase
SCNpilot_cont_750_p_scaffold_3847_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2283..3014
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIB3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL99204.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_3847_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3011..3664
DNA (654bp) protein (218aa)
Alpha-ketoglutarate-dependent dioxygenase AlkB n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6Y0_9GAMM
Alpha-ketoglutarate-dependent dioxygenase AlkB {ECO:0000313|EMBL:EIL95221.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
alkylated DNA repair protein
SCNpilot_cont_750_p_scaffold_3847_6
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3642..4070)
DNA (429bp) protein (143aa)
Putative membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NMK3_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_750_p_scaffold_3847_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4080..4421)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NFT1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88927.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_p_scaffold_3847_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4573..5496
DNA (924bp) protein (308aa)
Beta-lactamase n=1 Tax=Rhodanobacter denitrificans RepID=I4WXK5_9GAMM
Zn-dependent hydrolase, glyoxylase rbh
Zn-dependent hydrolase, glyoxylase {ECO:0000313|EMBL:AGG88928.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_p_scaffold_3847_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5515..6387)
DNA (873bp) protein (291aa)
Zn-dependent hydrolase, glyoxylase n=1 Tax=Rhodanobacter denitrificans RepID=M4NDX0_9GAMM
Zn-dependent hydrolase, glyoxylase rbh
Zn-dependent hydrolase, glyoxylase {ECO:0000313|EMBL:AGG88929.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_p_scaffold_3847_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6480..6827)
DNA (348bp) protein (116aa)
EMAP domain-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NDT4_9GAMM
EMAP domain-containing protein
EMAP domain-containing protein {ECO:0000313|EMBL:AGG88930.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_p_scaffold_3847_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6824..8113)
DNA (1290bp) protein (430aa)
Glycine/D-amino acid oxidase, deaminating n=1 Tax=Rhodanobacter denitrificans RepID=M4NMK9_9GAMM
glycine/D-amino acid oxidase, deaminating rbh
Glycine/D-amino acid oxidase, deaminating {ECO:0000313|EMBL:AGG88931.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_p_scaffold_3847_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8192..9067)
DNA (876bp) protein (292aa)
UDP-glucose pyrophosphorylase (EC:2.7.7.9) rbh
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
UDP-glucose pyrophosphorylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WXK1_9GAMM
SCNpilot_cont_750_p_scaffold_3847_13
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9064..10962)
DNA (1899bp) protein (633aa)
Putative nucleoside-diphosphate sugar epimerase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIA4_9GAMM
putative nucleoside-diphosphate sugar epimerase rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_750_p_scaffold_3847_14
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10949..11599)
DNA (651bp) protein (217aa)
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NDX6_9GAMM
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
Displaying 14 items

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