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SCNpilot_cont_750_p_scaffold_7419

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_7419_1
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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1..1233
DNA (1233bp) protein (411aa)
Conjugal transfer coupling protein TraG n=1 Tax=Ralstonia solanacearum SD54 RepID=V5AHV6_RALSL
Conjugal transfer protein TrbG {ECO:0000313|EMBL:KIO48703.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
traG; conjugal transfer protein TraG/VirD4
SCNpilot_cont_750_p_scaffold_7419_2
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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1197..1745
DNA (549bp) protein (183aa)
Type IV secretory pathway protease n=1 Tax=Ralstonia solanacearum SD54 RepID=V5A224_RALSL
Conjugal transfer protein TraF {ECO:0000313|EMBL:KIO48704.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Type IV secretory pathway protease TraF-like
SCNpilot_cont_750_p_scaffold_7419_3
Xenorhabdus bovienii, Xenorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1742..2260
DNA (519bp) protein (173aa)
Lytic transglycosylase, catalytic n=1 Tax=Klebsiella pneumoniae subsp. pneumoniae KPNIH18 RepID=J2HUF1_KLEPN
Lytic transglycosylase, catalytic {ECO:0000313|EMBL:CDG90691.1}; TaxID=1397852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Xenorhabdus.;" source="Xenorhabdus bovienii str. feltiae Florida.;"
lytic transglycosylase, catalytic; K03194 type IV secretion system protein VirB1
SCNpilot_cont_750_p_scaffold_7419_4
Xenorhabdus bovienii, Xenorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2302..3546)
DNA (1245bp) protein (415aa)
Conjugal transfer protein TrbI n=2 Tax=Proteobacteria RepID=V5CHL3_RALSL
Conjugation TrbI family protein {ECO:0000313|EMBL:CDH02258.1}; TaxID=1398200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Xenorhabdus.;" source="Xenorhabdus bovienii str. feltiae Moldova.;"
conjugation TrbI family protein; K03195 type IV secretion system protein VirB10
SCNpilot_cont_750_p_scaffold_7419_5
unknown

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comp(3585..4019)
DNA (435bp) protein (145aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_7419_6
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4037..4960)
DNA (924bp) protein (308aa)
Putative mating pair formation protein n=2 Tax=Ralstonia solanacearum RepID=V5AS01_RALSL
Conjugal transfer protein TrbG {ECO:0000313|EMBL:KIO48705.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
P-type conjugative transfer protein TrbG; K03204 type IV secretion system protein VirB9
SCNpilot_cont_750_p_scaffold_7419_7
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4942..5622)
DNA (681bp) protein (227aa)
conjugal transfer protein n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002376FBC
Conjugal transfer protein {ECO:0000313|EMBL:KIO48643.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
conjugal transfer protein; K03200 type IV secretion system protein VirB5
SCNpilot_cont_750_p_scaffold_7419_8
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5619..6785)
DNA (1167bp) protein (389aa)
P-type conjugative transfer protein TrbL n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SDQ4_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KIO48644.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
trbL; P-type conjugative transfer protein TrbL; K07344 type IV secretion system protein TrbL
SCNpilot_cont_750_p_scaffold_7419_9
unknown

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comp(6773..6988)
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_7419_10
unknown

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comp(6988..7188)
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_7419_11
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7190..7933)
DNA (744bp) protein (248aa)
P-type conjugative transfer protein TrbJ n=8 Tax=Gammaproteobacteria RepID=E6B912_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:KIO48646.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
trbJ; P-type conjugative transfer protein TrbJ
SCNpilot_cont_750_p_scaffold_7419_12
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7914..9302)
DNA (1389bp) protein (463aa)
CagE, TrbE, VirB component of type IV transporter system n=1 Tax=Ralstonia solanacearum SD54 RepID=V5AS05_RALSL
Transporter {ECO:0000313|EMBL:KIO48647.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
CagE, TrbE, VirB component of type IV transporter system; K03199 type IV secretion system protein VirB4
Displaying 12 items

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