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SCNpilot_cont_750_p_scaffold_2047

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_2047_1
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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406..786
DNA (381bp) protein (127aa)
NADH:ubiquinone oxidoreductase 17.2 kD subunit; K00356 NADH dehydrogenase [EC:1.6.99.3]
NADH:ubiquinone oxidoreductase 17.2 kD subunit n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HYB9_PARL1
NADH:ubiquinone oxidoreductase 17.2 kD subunit {ECO:0000313|EMBL:ABS64902.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_750_p_scaffold_2047_2
Thalassospira xiamenensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

814..1317
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI000360F822
Putative ABC transporter involved in resistance to organic solvents, periplasmic component {ECO:0000313|EMBL:AJD51656.1}; TaxID=1123366 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira xiamenensis M-5 = DSM 17429.;"
hypothetical protein; K02067 putative ABC transport system substrate-binding protein
SCNpilot_cont_750_p_scaffold_2047_3
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1314..1874
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JED6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EWY40115.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
cellulase-like protein
SCNpilot_cont_750_p_scaffold_2047_4
Phaeospirillum fulvum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1871..2503)
DNA (633bp) protein (211aa)
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088489}; EC=2.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088482};; L/F-transferase {ECO:0000256|HAMAP-Rule:MF_00688}; Leucyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; Phenyalanyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; TaxID=1316936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum fulvum MGU-K
aat; leucyl/phenylalanyl-tRNA--protein transferase (EC:2.3.2.6); K00684 leucyl/phenylalanyl-tRNA--protein transferase [EC:2.3.2.6]
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00038125B8
SCNpilot_cont_750_p_scaffold_2047_5
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2688..3059)
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Methylobacterium sp. MB200 RepID=UPI0003478A42
DoxX family protein; K15977 putative oxidoreductase
DoxX family protein {ECO:0000313|EMBL:ACL63151.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_cont_750_p_scaffold_2047_6
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3119..4471)
DNA (1353bp) protein (451aa)
acetyl-CoA carboxylase, biotin carboxylase; K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] rbh
Acetyl-CoA carboxylase, biotin carboxylase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HYB4_PARL1
Acetyl-CoA carboxylase, biotin carboxylase {ECO:0000313|EMBL:ABS64897.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_750_p_scaffold_2047_7
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4473..4952)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002E8E093
acetyl-CoA carboxylase, biotin carboxyl carrier protein; K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein
Tax=BJP_IG2102_Porphyrobacter_62_18
SCNpilot_cont_750_p_scaffold_2047_8
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4949..5419)
DNA (471bp) protein (157aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
3-dehydroquinate dehydratase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TX53_TISMK
aroQ; 3-dehydroquinate dehydratase
SCNpilot_cont_750_p_scaffold_2047_9
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5499..6497
DNA (999bp) protein (333aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
Thiazole synthase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TX52_TISMK
thiG; bifunctional sulfur carrier protein/thiazole synthase rbh
SCNpilot_cont_750_p_scaffold_2047_10
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6494..7387)
DNA (894bp) protein (298aa)
Putative transcriptional regulatory protein,LysR family OprD regulatory protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EPL6_9RHIZ
Putative transcriptional regulatory protein,LysR family OprD regulatory protein {ECO:0000313|EMBL:CCV06090.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
transcriptional regulator
SCNpilot_cont_750_p_scaffold_2047_11
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7484..8464
DNA (981bp) protein (327aa)
Aldo/keto reductase n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KDM1_9BACT
aldo/keto reductase rbh
Aldo/keto reductase {ECO:0000313|EMBL:CCH02224.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
SCNpilot_cont_750_p_scaffold_2047_12
Rhodobacterales bacterium Y4I, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8461..9201)
DNA (741bp) protein (247aa)
27kDa outer membrane protein n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6B7N3_9RHOB
27kDa outer membrane protein {ECO:0000313|EMBL:EDZ46934.1}; TaxID=439496 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales.;" source="Rhodobacterales bacterium Y4I.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_2047_13
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(9213..10577)
DNA (1365bp) protein (455aa)
hypothetical protein n=1 Tax=Woodsholea maritima RepID=UPI000365C453
Peptidase M48, Ste24p {ECO:0000313|EMBL:KIF23085.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
peptidase M48, Ste24p
SCNpilot_cont_750_p_scaffold_2047_14
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10747..12171
DNA (1425bp) protein (475aa)
Gamma-glutamyltranspeptidase {ECO:0000313|EMBL:CDO60913.1}; EC=2.3.2.2 {ECO:0000313|EMBL:CDO60913.1};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
gamma-glutamyltranspeptidase; K00681 gamma-glutamyltranspeptidase [EC:2.3.2.2]
Gamma-glutamyltranspeptidase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HYA1_PARL1
SCNpilot_cont_750_p_scaffold_2047_15
Labrenzia alexandrii, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12352..15111)
DNA (2760bp) protein (920aa)
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia alexandrii (strain DSM 17067 / NCIMB 14079 / DFL-11); (Stappia alexandrii).;"
Ribonuclease E and G domain-containing protein; K08300 ribonuclease E [EC:3.1.26.12]
Ribonuclease E n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QXC4_9RHOB
SCNpilot_cont_750_p_scaffold_2047_16
Gallaecimonas xiamenensis, Gallaecimonas, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16029..18752
DNA (2724bp) protein (908aa)
TonB-dependent receptor n=1 Tax=Gallaecimonas xiamenensis 3-C-1 RepID=K2J106_9GAMM
TonB-dependent receptor {ECO:0000313|EMBL:EKE68748.1}; TaxID=745411 species="Bacteria; Proteobacteria; Gammaproteobacteria; Gallaecimonas.;" source="Gallaecimonas xiamenensis 3-C-1.;"
TonB-dependent receptor
SCNpilot_cont_750_p_scaffold_2047_17
unknown

Not on your lists

comp(18833..19111)
DNA (279bp) protein (93aa)

This feature has no annotations

Displaying 17 items

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