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SCNpilot_cont_750_p_scaffold_2239

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_2239_1
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..826)
DNA (825bp) protein (275aa)
aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
Aldehyde dehydrogenase n=1 Tax=Nitratireductor indicus C115 RepID=K2P0N7_9RHIZ
Aldehyde dehydrogenase {ECO:0000313|EMBL:EKF40911.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
SCNpilot_cont_750_p_scaffold_2239_2
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1032..2504
DNA (1473bp) protein (491aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49); K00036 glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49]
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HXT4_9RHIZ
SCNpilot_cont_750_p_scaffold_2239_3
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2515..3234
DNA (720bp) protein (240aa)
6-phosphogluconolactonase; K01057 6-phosphogluconolactonase [EC:3.1.1.31]
UPI0003CEBA48 related cluster n=1 Tax=unknown RepID=UPI0003CEBA48
6-phosphogluconolactonase {ECO:0000313|EMBL:ESW84102.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
SCNpilot_cont_750_p_scaffold_2239_4
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3289..5106
DNA (1818bp) protein (606aa)
phosphogluconate dehydratase (EC:4.2.1.12); K01690 phosphogluconate dehydratase [EC:4.2.1.12]
phosphogluconate dehydratase n=1 Tax=Hoeflea sp. 108 RepID=UPI00036D565C
Phosphogluconate dehydratase {ECO:0000313|EMBL:EXL03200.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
SCNpilot_cont_750_p_scaffold_2239_5
unknown

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5174..5479
DNA (306bp) protein (102aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_2239_6
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5553..6239)
DNA (687bp) protein (229aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
ribulose-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1]
UPI0003CFD605 related cluster n=1 Tax=unknown RepID=UPI0003CFD605
SCNpilot_cont_750_p_scaffold_2239_7
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6489..7661)
DNA (1173bp) protein (391aa)
acetylornithine deacetylase; K01438 acetylornithine deacetylase [EC:3.5.1.16] rbh
Acetylornithine deacetylase {ECO:0000256|SAAS:SAAS00063950}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00279026};; EC=3.5.1.- {ECO:0000256|SAAS:SAAS00279018};; EC=3.5.1.16 {ECO:0000256|SAAS:SAAS00063953};; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
Acetylornithine deacetylase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7X7_PELHB
SCNpilot_cont_750_p_scaffold_2239_8
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7882..9066)
DNA (1185bp) protein (395aa)
X-Pro dipeptidase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F246FC
X-Pro dipeptidase {ECO:0000313|EMBL:KGM34156.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
ectoine utilization protein EutD; K15783 ectoine hydrolase
SCNpilot_cont_750_p_scaffold_2239_9
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9090..10082)
DNA (993bp) protein (331aa)
ornithine cyclodeaminase; K01750 ornithine cyclodeaminase [EC:4.3.1.12]
Ornithine cyclodeaminase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7X9_PELHB
Ectoine utilization protein EutC {ECO:0000313|EMBL:KGD96566.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
SCNpilot_cont_750_p_scaffold_2239_10
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10094..11068)
DNA (975bp) protein (325aa)
Threonine dehydratase {ECO:0000313|EMBL:EJT02117.1}; EC=4.3.1.19 {ECO:0000313|EMBL:EJT02117.1};; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
threonine dehydratase; K01754 threonine dehydratase [EC:4.3.1.19]
Threonine dehydratase n=1 Tax=Rhizobium sp. CCGE 510 RepID=J4T6K1_9RHIZ
SCNpilot_cont_750_p_scaffold_2239_11
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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11427..12311
DNA (885bp) protein (295aa)
Probable amino-acid ABC transporter periplasmic-binding protein y4tE n=1 Tax=Rhizobium sp. (strain NGR234) RepID=Y4TE_RHISN
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KDB01637.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;"
amino acid ABC transporter substrate-binding protein; K02030 polar amino acid transport system substrate-binding protein rbh
SCNpilot_cont_750_p_scaffold_2239_12
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12450..13121
DNA (672bp) protein (224aa)
Amino-acid ABC transporter permease y4tF n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GW63_PUSST
amino acid ABC transporter permease; K02029 polar amino acid transport system permease protein rbh
Amino-acid ABC transporter permease y4tF {ECO:0000313|EMBL:AEC20077.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
SCNpilot_cont_750_p_scaffold_2239_13
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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13125..13820
DNA (696bp) protein (232aa)
Probable amino-acid ABC transporter permease protein y4tG n=1 Tax=Rhizobium sp. (strain NGR234) RepID=Y4TG_RHISN
Amino acid ABC transporter permease {ECO:0000313|EMBL:KDB01639.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;"
amino acid ABC transporter permease; K02029 polar amino acid transport system permease protein
SCNpilot_cont_750_p_scaffold_2239_14
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13817..14590
DNA (774bp) protein (258aa)
Ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA 1 n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5SR38_RHIET
ehuA-1; ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA 1
Ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA 1 {ECO:0000313|EMBL:AGS24497.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
SCNpilot_cont_750_p_scaffold_2239_15
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14649..15248
DNA (600bp) protein (200aa)
Leucine-responsive regulatory protein, regulator for leucine (Or lrp) regulon and high-affinity branched-chain amino acid transport system n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7Y5_PELHB
leucine-responsive regulatory protein; K15782 Lrp/AsnC family transcriptional regulator, regulator of ectoine-degradation genes
Leucine-responsive regulatory protein, regulator for leucine (Or lrp) regulon and high-affinity branched-chain amino acid transport system {ECO:0000313|EMBL:AEQ50280.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
SCNpilot_cont_750_p_scaffold_2239_16
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15376..16875
DNA (1500bp) protein (500aa)
succinate-semialdehyde dehydrogenase; K15786 aspartate-semialdehyde dehydrogenase [EC:1.2.1.-] rbh
Succinate-semialdehyde dehydrogenase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7Y9_PELHB
Succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:AEQ50284.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
SCNpilot_cont_750_p_scaffold_2239_17
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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16907..17695
DNA (789bp) protein (263aa)
gamma-aminobutyrate:alpha-ketoglutarate aminotransferase; K15785 L-2,4-diaminobutyrate transaminase [EC:2.6.1.-]
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MQP4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF19622.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
Displaying 17 items

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