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SCNpilot_cont_750_p_scaffold_2380

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_2380_1
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1..186
DNA (186bp) protein (62aa)
Endonuclease 8 1 {ECO:0000313|EMBL:KJL25371.1}; EC=3.2.2.- {ECO:0000313|EMBL:KJL25371.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
formamidopyrimidine-DNA glycosylase; K05522 endonuclease VIII [EC:3.2.2.- 4.2.99.18]
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000348E92B
SCNpilot_cont_750_p_scaffold_2380_2
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(419..826)
DNA (408bp) protein (136aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase {ECO:0000313|EMBL:KJL25372.1}; EC=2.3.1.89 {ECO:0000313|EMBL:KJL25372.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00031A4AE6
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
SCNpilot_cont_750_p_scaffold_2380_3
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1017..1757
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002FB0B4B
Hca operon transcriptional activator {ECO:0000313|EMBL:KJL25373.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
transcriptional regulator
SCNpilot_cont_750_p_scaffold_2380_4
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1985..4531)
DNA (2547bp) protein (849aa)
ATPase AAA n=1 Tax=Agromyces subbeticus RepID=UPI0003B65A8C
ATP-dependent Clp protease ATP-binding subunit ClpC {ECO:0000313|EMBL:KJL25374.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
ATPase with chaperone activity, ATP-binding subunit; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC
SCNpilot_cont_750_p_scaffold_2380_5
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4650..5390
DNA (741bp) protein (247aa)
GMP synthase - glutamine amidotransferase domain; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000349CFD3
Glutamine amidotransferase {ECO:0000313|EMBL:KJL32405.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
SCNpilot_cont_750_p_scaffold_2380_6
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5599..6081)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003463B6C
Uncharacterized protein {ECO:0000313|EMBL:KJL25376.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
glutaminase
SCNpilot_cont_750_p_scaffold_2380_7
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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6141..7220
DNA (1080bp) protein (360aa)
Sugar-binding domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RD60_LEIAQ
Catabolite control protein A {ECO:0000313|EMBL:KJL32403.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
SC3A7.17; transcriptional regulator
SCNpilot_cont_750_p_scaffold_2380_8
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7538..10159
DNA (2622bp) protein (874aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003602DE8
F5/8 type C domain protein {ECO:0000313|EMBL:KJL25378.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein rbh
SCNpilot_cont_750_p_scaffold_2380_9
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10286..11137
DNA (852bp) protein (284aa)
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
purU; formyltetrahydrofolate deformylase; K01433 formyltetrahydrofolate deformylase [EC:3.5.1.10] rbh
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003222328
SCNpilot_cont_750_p_scaffold_2380_10
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11184..12227)
DNA (1044bp) protein (348aa)
Nitronate monooxygenase {ECO:0000313|EMBL:KJL25380.1}; EC=1.13.12.16 {ECO:0000313|EMBL:KJL25380.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
dioxygenase; K00459 nitronate monooxygenase [EC:1.13.12.16] rbh
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000349B6BA
SCNpilot_cont_750_p_scaffold_2380_11
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12289..13221)
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003268F17
Threonine/homoserine exporter RhtA {ECO:0000313|EMBL:KJL32399.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
putative permease, DMT superfamily; K11939 inner membrane transporter RhtA rbh
SCNpilot_cont_750_p_scaffold_2380_12
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13345..14502)
DNA (1158bp) protein (386aa)
L-threonine 3-dehydrogenase {ECO:0000313|EMBL:KJL32398.1}; EC=1.1.1.103 {ECO:0000313|EMBL:KJL32398.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000348130C
phosphonate catabolism associated alcohol dehydrogenase
SCNpilot_cont_750_p_scaffold_2380_13
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14504..15274)
DNA (771bp) protein (257aa)
Phosphonoacetaldehyde hydrolase {ECO:0000313|EMBL:KJL32397.1}; EC=3.11.1.1 {ECO:0000313|EMBL:KJL32397.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KGW8_9MICO
putative haloacid dehalogenase-like hydrolase
SCNpilot_cont_750_p_scaffold_2380_14
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15271..16530)
DNA (1260bp) protein (420aa)
D-amino acid dehydrogenase small subunit {ECO:0000313|EMBL:KJL32396.1}; EC=1.4.99.1 {ECO:0000313|EMBL:KJL32396.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00035EF7FC
phytoene dehydrogenase
SCNpilot_cont_750_p_scaffold_2380_15
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16527..16901)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003262309
Phosphate-import permease protein PhnE {ECO:0000313|EMBL:KJL32395.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
phnE; phosphonates transport system permease; K02042 phosphonate transport system permease protein
Displaying 15 items

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