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SCNpilot_cont_750_p_scaffold_2556

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_2556_1
bacterium YEK0313, Bacteria

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comp(3..875)
DNA (873bp) protein (291aa)
Hydantoinase beta subunit-like protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JFE0_HYPSM
Acetone carboxylase beta subunit {ECO:0000313|EMBL:CEJ13149.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
Hydantoinase subunit beta-like protein
SCNpilot_cont_750_p_scaffold_2556_2
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(872..1957)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J3CE35_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KJC59314.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein; K09703 hypothetical protein
SCNpilot_cont_750_p_scaffold_2556_3
bacterium YEK0313, Bacteria

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2229..3170
DNA (942bp) protein (314aa)
Transcriptional regulator, LuxR family n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11H78_MESSB
Tetrathionate response regulatory protein TtrR {ECO:0000313|EMBL:CEJ13151.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
LuxR family transcriptional regulator
SCNpilot_cont_750_p_scaffold_2556_4
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3287..3943
DNA (657bp) protein (219aa)
AroM protein n=2 Tax=Burkholderiaceae RepID=Q0K9C3_CUPNH
Uncharacterized protein {ECO:0000313|EMBL:KJC59316.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
aroM; hypothetical protein; K14591 protein AroM
SCNpilot_cont_750_p_scaffold_2556_5
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3985..5586
DNA (1602bp) protein (534aa)
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Rhizobium sp. CF080 RepID=J2K8Q2_9RHIZ
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGE00152.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
dppAch2; ABC transporter, substrate-binding protein (Dipeptide)
SCNpilot_cont_750_p_scaffold_2556_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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5667..6677
DNA (1011bp) protein (337aa)
Binding-protein-dependent transport systems inner membrane component domain protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8U4H5_9PROT
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
SCNpilot_cont_750_p_scaffold_2556_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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6674..7600
DNA (927bp) protein (309aa)
cytochrome C550 n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002375A72
dppC8; peptide ABC transporter permease; K02034 peptide/nickel transport system permease protein rbh
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
SCNpilot_cont_750_p_scaffold_2556_8
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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7597..8619
DNA (1023bp) protein (341aa)
Predicted S-transferase n=1 Tax=alpha proteobacterium BAL199 RepID=A8U2V0_9PROT
Predicted S-transferase {ECO:0000313|EMBL:EDP61564.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
oligopeptide/dipeptide ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein
SCNpilot_cont_750_p_scaffold_2556_9
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8612..9601
DNA (990bp) protein (330aa)
Dipeptide transport ATP-binding protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8U2U9_9PROT
Dipeptide transport ATP-binding protein {ECO:0000313|EMBL:EDP61563.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
oligopeptide/dipeptide ABC transporter ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein
SCNpilot_cont_750_p_scaffold_2556_10
Hyphomonas sp. CY54-11-8, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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10289..12202
DNA (1914bp) protein (638aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031F2F4F
NTPase KAP {ECO:0000313|EMBL:KCZ47198.1}; TaxID=1280944 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. CY54-11-8.;"
NTPase KAP
SCNpilot_cont_750_p_scaffold_2556_11
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12202..13062
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BI34_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK59810.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_750_p_scaffold_2556_12
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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13059..14417
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R9S2_PHEZH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG77836.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCNpilot_cont_750_p_scaffold_2556_13
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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14414..15208
DNA (795bp) protein (265aa)
hypothetical protein; K03424 TatD DNase family protein [EC:3.1.21.-]
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00031246D6
Tax=GWC2_Geobacteraceae_53_11_curated
SCNpilot_cont_750_p_scaffold_2556_14
bacterium YEK0313, Bacteria

Not on your lists

comp(15652..15957)
DNA (306bp) protein (102aa)
sulfite reductase; K00380 sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037F2AA3
Sulfite reductase [NADPH] flavoprotein alpha-component {ECO:0000313|EMBL:CEJ12827.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
Displaying 14 items

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