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SCNpilot_cont_750_p_scaffold_571

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_571_1
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..689
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=T0B0F2_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:EPZ16308.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_571_2
Thauera aminoaromatica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1006..1662
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI000360F7E2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ENO88997.1}; TaxID=1234381 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera aminoaromatica S2.;"
SCNpilot_cont_750_p_scaffold_571_3
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1730..2839
DNA (1110bp) protein (370aa)
Conserved hypothetical plasmid protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P5C0_AROAE
hypothetical protein rbh
Conserved hypothetical plasmid protein {ECO:0000313|EMBL:CAI07492.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
SCNpilot_cont_750_p_scaffold_571_4
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2941..3246
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZS17_9RHOO
O-methyl transferase family protein {ECO:0000313|EMBL:GAO21699.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_571_5
unknown

Not on your lists

comp(3159..3341)
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_571_6
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3346..5616
DNA (2271bp) protein (757aa)
Conserved plasmid related protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P5C2_AROAE
Conserved plasmid related protein {ECO:0000313|EMBL:CAI07490.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
hypothetical protein rbh
SCNpilot_cont_750_p_scaffold_571_7
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5743..6363
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4ZN87_THASP
Integrating conjugative element protein PilL {ECO:0000313|EMBL:GAO21701.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein; K02487 type IV pili sensor histidine kinase and response regulator
SCNpilot_cont_750_p_scaffold_571_8
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6360..7004
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BE10_RALP1
Uncharacterized protein {ECO:0000313|EMBL:GAO21702.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_571_9
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7014..7745
DNA (732bp) protein (244aa)
Putative secreted protein n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BE11_RALP1
Putative exported protein {ECO:0000313|EMBL:GAO21703.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_571_10
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7730..8320
DNA (591bp) protein (197aa)
Uncharacterized protein n=4 Tax=Proteobacteria RepID=S2WZ64_DELAC
Soluble lytic murein transglycosylase {ECO:0000313|EMBL:GAO21704.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
lytic transglycosylase catalytic subunit
SCNpilot_cont_750_p_scaffold_571_11
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8317..8877
DNA (561bp) protein (187aa)
Integrating conjugative element protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QKQ8_RALPI
Integrating conjugative element protein {ECO:0000313|EMBL:GAO21705.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_571_12
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8903..11062
DNA (2160bp) protein (720aa)
Conjugal transfer protein TraG n=1 Tax=Pseudomonas aeruginosa VRFPA06 RepID=V8HY95_PSEAI
Type IV secretory pathway, VirD4 components {ECO:0000313|EMBL:GAO21706.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_571_13
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11059..11808
DNA (750bp) protein (250aa)
Integrating conjugative element membrane protein, PFL_4697 family n=1 Tax=Burkholderia multivorans ATCC BAA-247 RepID=J4JND2_9BURK
Integrating conjugative element membrane protein {ECO:0000313|EMBL:GAO21707.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_571_14
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11792..13288)
DNA (1497bp) protein (499aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=S4UTD4_9BACT
Tax=RBG_16_Gamma2_64_11_curated
SCNpilot_cont_750_p_scaffold_571_15
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13324..13572)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P5D2_AROAE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI07480.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
SCNpilot_cont_750_p_scaffold_571_16
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13591..14895)
DNA (1305bp) protein (435aa)
HipA domain-containing protein; K07154 serine/threonine-protein kinase HipA [EC:2.7.11.1] rbh
HipA domain protein n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WSM2_VEREI
Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
SCNpilot_cont_750_p_scaffold_571_17
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14895..15221)
DNA (327bp) protein (109aa)
Putative DNA-binding protein n=2 Tax=Bordetella bronchiseptica RepID=K4QNR2_BORBO
Transcriptional regulator, y4mF family {ECO:0000313|EMBL:EXI73272.1}; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
DNA-binding protein
SCNpilot_cont_750_p_scaffold_571_18
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15512..15901
DNA (390bp) protein (130aa)
Integrative conjugative element protein, RAQPRD family n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QNA4_RALPI
Integrative conjugative element protein, RAQPRD family {ECO:0000313|EMBL:AGW91603.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_571_19
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15898..16137
DNA (240bp) protein (80aa)
Integrating conjugative element protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QU47_RALPI
Integrating conjugative element protein {ECO:0000313|EMBL:AGW91602.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_571_20
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16161..16553
DNA (393bp) protein (131aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=F8H203_PSEUT
Integrating conjugative element membrane protein {ECO:0000313|EMBL:GAO21712.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_571_21
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16566..17051
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BE19_RALP1
Conjugative transfer region protein {ECO:0000313|EMBL:GAO21713.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_571_22
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17048..17749
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BE20_RALP1
Putative exported protein {ECO:0000313|EMBL:GAO21714.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_571_23
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17746..18678
DNA (933bp) protein (311aa)
Integrating conjugative element protein, PFL_4704 family n=1 Tax=Burkholderia multivorans ATCC BAA-247 RepID=J5CJN3_9BURK
Integrating conjugative element protein {ECO:0000313|EMBL:GAO21715.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_571_24
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18668..20146
DNA (1479bp) protein (493aa)
Integrating conjugative element protein, PFL_4705 family n=1 Tax=Burkholderia multivorans ATCC BAA-247 RepID=J5CQ68_9BURK
Integrating conjugative element protein {ECO:0000313|EMBL:GAO21716.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_571_25
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20127..20561
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BE23_RALP1
Lipoprotein {ECO:0000313|EMBL:GAO21717.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_571_26
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20561..23464
DNA (2904bp) protein (968aa)
Conjugative transfer ATPase, PFL_4706 family n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G755_ALIDK
Type IV secretory pathway, VirB4 components {ECO:0000313|EMBL:GAO21718.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
conjugative transfer ATPase
SCNpilot_cont_750_p_scaffold_571_27
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23476..24243
DNA (768bp) protein (256aa)
DSBA oxidoreductase n=6 Tax=Proteobacteria RepID=S9S1Y8_9RALS
Protein-disulfide isomerase {ECO:0000313|EMBL:GAO21719.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
DSBA oxidoreductase
SCNpilot_cont_750_p_scaffold_571_28
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24436..24930
DNA (495bp) protein (165aa)
DNA repair protein similar to radC-family n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P5E6_AROAE
DNA repair protein RadC {ECO:0000313|EMBL:GAO21720.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
RadC family DNA repair protein
SCNpilot_cont_750_p_scaffold_571_29
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25107..25556
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BE27_RALP1
Integrating conjugative element protein {ECO:0000313|EMBL:GAO21722.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_571_30
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25553..26503
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BE28_RALP1
Integrating conjugative element protein {ECO:0000313|EMBL:GAO21723.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein rbh
Displaying items 1-30 of 53 in total

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