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SCNpilot_cont_750_p_scaffold_976

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Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_976_1
bacterium YEK0313, Bacteria

Not on your lists

2..415
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF142 RepID=J1SXR0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CEJ15103.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_976_2
bacterium YEK0313, Bacteria

Not on your lists

424..1059
DNA (636bp) protein (212aa)
L-fuculose phosphate aldolase (EC:4.1.2.17)
Putative class II aldolase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FIN1_9RHIZ
L-fuculose phosphate aldolase {ECO:0000313|EMBL:CEJ15104.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCNpilot_cont_750_p_scaffold_976_3
bacterium YEK0313, Bacteria

Not on your lists

1056..1835
DNA (780bp) protein (260aa)
Hydroxypyruvate isomerase {ECO:0000256|PIRNR:PIRNR006241}; EC=5.3.1.22 {ECO:0000256|PIRNR:PIRNR006241};; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hydroxypyruvate isomerase (EC:5.3.1.22); K01816 hydroxypyruvate isomerase [EC:5.3.1.22]
Hydroxypyruvate isomerase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FMC7_9RHIZ
SCNpilot_cont_750_p_scaffold_976_4
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1890..3146
DNA (1257bp) protein (419aa)
ATP-binding region ATPase domain protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TJX0_MESCW
ATPase domain-containing protein
ATPase {ECO:0000313|EMBL:ESZ26190.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
SCNpilot_cont_750_p_scaffold_976_5
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3146..3889
DNA (744bp) protein (248aa)
Response regulator receiver n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y6W5_9RHIZ
Response regulator receiver {ECO:0000313|EMBL:CDX25663.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
response regulator receiver
SCNpilot_cont_750_p_scaffold_976_6
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4006..4197
DNA (192bp) protein (64aa)
4-oxalocrotonate tautomerase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y6W6_9RHIZ
4-oxalocrotonate tautomerase {ECO:0000313|EMBL:EHH12526.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
uncharacterized protein, 4-oxalocrotonate tautomerase
SCNpilot_cont_750_p_scaffold_976_7
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4203..5087
DNA (885bp) protein (295aa)
gluconolactonase (EC:3.1.1.17); K01053 gluconolactonase [EC:3.1.1.17]
Gluconolactonase {ECO:0000313|EMBL:ADV10230.1}; EC=3.1.1.17 {ECO:0000313|EMBL:ADV10230.1};; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
Gluconolactonase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TJX3_MESCW
SCNpilot_cont_750_p_scaffold_976_8
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5217..6230
DNA (1014bp) protein (338aa)
UPI0003CE6910 related cluster n=1 Tax=unknown RepID=UPI0003CE6910
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESW82084.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
D-ribose substrate-binding protein; K02058 simple sugar transport system substrate-binding protein
SCNpilot_cont_750_p_scaffold_976_9
Mesorhizobium sp. LNJC394B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6279..7748
DNA (1470bp) protein (490aa)
sugar ABC transporter ATP-binding protein; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17] rbh
UPI0003CE560D related cluster n=1 Tax=unknown RepID=UPI0003CE560D
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESY18412.1}; TaxID=1287274 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC394B00.;"
SCNpilot_cont_750_p_scaffold_976_10
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7750..8727
DNA (978bp) protein (326aa)
UPI0003CFCC25 related cluster n=1 Tax=unknown RepID=UPI0003CFCC25
Putative ribose ABC transporter, permease {ECO:0000313|EMBL:CDX30676.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
permease component of ribose/xylose/arabinose/galactoside ABC-type transporters
SCNpilot_cont_750_p_scaffold_976_11
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8728..9675
DNA (948bp) protein (316aa)
Putative ribose ABC transporter, permease n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EK84_9RHIZ
Putative ribose ABC transporter, permease {ECO:0000313|EMBL:CCV04528.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
inner-membrane translocator; K02057 simple sugar transport system permease protein
SCNpilot_cont_750_p_scaffold_976_12
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9690..10043)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036E7F42
Uncharacterized protein {ECO:0000313|EMBL:BAQ17797.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_976_13
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10130..12358)
DNA (2229bp) protein (743aa)
adenylate cyclase (EC:4.6.1.1)
Adenylate cyclase {ECO:0000313|EMBL:AGT11165.1}; EC=4.6.1.1 {ECO:0000313|EMBL:AGT11165.1};; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
Adenylate cyclase n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5Y696_PARAH
SCNpilot_cont_750_p_scaffold_976_14
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12491..13342)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QRF1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF57607.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_976_15
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13345..14796)
DNA (1452bp) protein (484aa)
Tetratricopeptide TPR_2 n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2P9M6_9RHIZ
Tetratricopeptide TPR_2 {ECO:0000313|EMBL:EKF57608.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_976_16
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15040..15369)
DNA (330bp) protein (110aa)
Anti-anti-sigma factor n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EFR6_9RHIZ
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
btrV; anti-sigma factor antagonist btrV
SCNpilot_cont_750_p_scaffold_976_17
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15511..16560
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI000372A1D3
Anti-sigma regulatory factor (Ser/Thr protein kinase) {ECO:0000313|EMBL:EYR83986.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
anti-sigma regulatory factor, serine/threonine protein kinase
SCNpilot_cont_750_p_scaffold_976_18
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16557..16937
DNA (381bp) protein (127aa)
PAAR repeat-containing protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EEM6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KJS45173.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_976_19
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17055..18131
DNA (1077bp) protein (359aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI00037228F1
Methyltransferase domain-containing protein {ECO:0000313|EMBL:EYR83988.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_976_20
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18246..18869
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CMQ0_9RHIZ
FHA domain-containing protein {ECO:0000313|EMBL:EYR83989.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
FHA domain-containing protein; K11894 type VI secretion system protein ImpI
SCNpilot_cont_750_p_scaffold_976_21
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18910..19416
DNA (507bp) protein (169aa)
Type VI secretion lipoprotein, VC_A0113 family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CDC8_9RHIZ
Type VI secretion lipoprotein, VC_A0113 family {ECO:0000313|EMBL:EYR83990.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_976_22
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19474..20811
DNA (1338bp) protein (446aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI00036C9A3D
Type VI secretion protein, VC_A0114 family {ECO:0000313|EMBL:EYR83991.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein; K11893 type VI secretion system protein ImpJ
SCNpilot_cont_750_p_scaffold_976_23
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20827..22299
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EEL4_9RHIZ
Type IV / VI secretion system protein, DotU family {ECO:0000313|EMBL:EYR83992.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_976_24
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22301..24109
DNA (1809bp) protein (603aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI000371E5AA
Uncharacterized protein {ECO:0000313|EMBL:EYR83993.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Hypothetical Protein
SCNpilot_cont_750_p_scaffold_976_25
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24106..27657
DNA (3552bp) protein (1184aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI0003817D21
Type VI secretion protein IcmF {ECO:0000313|EMBL:EYR83994.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative Type VI secretion protein IcmF-like; K11891 type VI secretion system protein ImpL
SCNpilot_cont_750_p_scaffold_976_26
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27662..29488
DNA (1827bp) protein (609aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5BWX7_9RHIZ
Type VI secretion protein, VC_A0110 family {ECO:0000313|EMBL:EYR83995.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein; K11896 type VI secretion system protein ImpG
SCNpilot_cont_750_p_scaffold_976_27
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29452..30543
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI000366F85F
Type VI secretion protein, VC_A0111 family {ECO:0000313|EMBL:EYR83996.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein; K11895 type VI secretion system protein ImpH
SCNpilot_cont_750_p_scaffold_976_28
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30567..32111
DNA (1545bp) protein (515aa)
Methylase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CQ40_9RHIZ
Methylase {ECO:0000313|EMBL:EYR83997.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
ubiE; methylase rbh
SCNpilot_cont_750_p_scaffold_976_29
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32087..32956
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI0003673397
Protein kinase domain-containing protein {ECO:0000313|EMBL:EYR83998.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
serine/threonine protein kinase
SCNpilot_cont_750_p_scaffold_976_30
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32887..33393)
DNA (507bp) protein (169aa)
Type VI secretion system lysozyme-like protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ERG6_9RHIZ
Type VI secretion system lysozyme-like protein {ECO:0000313|EMBL:EYR83976.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
type VI secretion system lysozyme-like protein; K11897 type VI secretion system protein ImpF
Displaying items 1-30 of 32 in total

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