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SCNpilot_cont_750_p_scaffold_8488

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_8488_1
unknown

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comp(1..84)
DNA (84bp) protein (28aa)
Integral membrane protease subunit n=1 Tax=Rhodanobacter denitrificans RepID=I4WV76_9GAMM
SCNpilot_cont_750_p_scaffold_8488_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(253..1554)
DNA (1302bp) protein (434aa)
GTPase HflX n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIU2_9GAMM
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
GTP-binding protein HflX rbh
SCNpilot_cont_750_p_scaffold_8488_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1612..1899)
DNA (288bp) protein (96aa)
RNA-binding protein Hfq n=1 Tax=Rhodanobacter denitrificans RepID=I4WV78_9GAMM
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
RNA-binding protein Hfq
SCNpilot_cont_750_p_scaffold_8488_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2032..3000)
DNA (969bp) protein (323aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobact
tRNA dimethylallyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WV79_9GAMM
tRNA isopentenyltransferase MiaA rbh
SCNpilot_cont_750_p_scaffold_8488_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3080..5242)
DNA (2163bp) protein (721aa)
Peptidase S46 n=1 Tax=Rhodanobacter denitrificans RepID=M4ND84_9GAMM
Peptidase S46 {ECO:0000313|EMBL:AGG88700.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Peptidase S46 rbh
SCNpilot_cont_750_p_scaffold_8488_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5516..6118
DNA (603bp) protein (201aa)
L-threonine 3-dehydrogenase (EC:1.1.1.103)
L-threonine 3-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00627, ECO:0000256|SAAS:SAAS00056053}; EC=1.1.1.103 {ECO:0000256|HAMAP-Rule:MF_00627, ECO:0000256|SAAS:SAAS00056053};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
L-threonine 3-dehydrogenase n=2 Tax=Rhodanobacter denitrificans RepID=M4NGB9_9GAMM
Displaying 6 items

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