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SCNpilot_cont_750_p_scaffold_5356

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_5356_1
unknown

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comp(2..82)
DNA (81bp) protein (27aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_5356_2
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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230..565
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TT42_ALIDB
Uncharacterized protein {ECO:0000313|EMBL:GAO23353.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_5356_3
unknown

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comp(642..1034)
DNA (393bp) protein (131aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_5356_4
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1276..2490)
DNA (1215bp) protein (405aa)
Type II secretion system protein E n=1 Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2TH89_BURPP
Type II secretion system protein E {ECO:0000313|EMBL:GAO22530.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
type II secretion system protein E; K03196 type IV secretion system protein VirB11 rbh
SCNpilot_cont_750_p_scaffold_5356_5
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2493..3716)
DNA (1224bp) protein (408aa)
VirB10: conjugal transfer protein n=1 Tax=uncultured bacterium RepID=U3LPY7_9BACT
Conjugation TrbI family protein {ECO:0000313|EMBL:GAO22531.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
conjugation TrbI family protein
SCNpilot_cont_750_p_scaffold_5356_6
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3713..4546)
DNA (834bp) protein (278aa)
Putative P-type conjugative transfer protein VirB9 n=1 Tax=Kingella denitrificans ATCC 33394 RepID=F0EY99_9NEIS
Type IV secretory pathway, VirB9 component {ECO:0000313|EMBL:GAO22532.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
Conjugal transfer-like protein
SCNpilot_cont_750_p_scaffold_5356_7
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4543..5559)
DNA (1017bp) protein (339aa)
Type IV secretory pathway component VirB8 protein-like protein n=1 Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2TH86_BURPP
Type IV secretory pathway component VirB8 protein-like protein {ECO:0000313|EMBL:GAO22533.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
Type IV secretory pathway component VirB8 protein-like protein
SCNpilot_cont_750_p_scaffold_5356_8
unknown

Not on your lists

comp(5573..5722)
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_5356_9
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5719..6711)
DNA (993bp) protein (331aa)
TrbL/VirB6 plasmid conjugal transfer protein n=1 Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2TH85_BURPP
TrbL/VirB6 plasmid conjugal transfer protein {ECO:0000313|EMBL:GAO22534.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
TrbL/VirB6 plasmid conjugal transfer protein
SCNpilot_cont_750_p_scaffold_5356_10
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6724..7044)
DNA (321bp) protein (107aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO22535.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_cont_750_p_scaffold_5356_11
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7054..7776)
DNA (723bp) protein (241aa)
VirB5 n=1 Tax=Collimonas fungivorans RepID=B0ZB81_9BURK
TraF/VirB5 protein {ECO:0000313|EMBL:GAO22536.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
conjugal transfer protein; K03200 type IV secretion system protein VirB5
SCNpilot_cont_750_p_scaffold_5356_12
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7798..8868)
DNA (1071bp) protein (357aa)
CagE TrbE VirB component of type IV transporter system n=1 Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2TH83_BURPP
CagE TrbE VirB component of type IV transporter system {ECO:0000313|EMBL:GAO22537.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
CagE TrbE VirB component of type IV transporter system
Displaying 12 items

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