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SCNpilot_cont_750_p_scaffold_5867

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_5867_1
Chromohalobacter salexigens, Chromohalobacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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81..626
DNA (546bp) protein (182aa)
Tripartite ATP-independent periplasmic transporter, DctQ component n=1 Tax=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) RepID=Q1QUN3_CHRSD
tripartite ATP-independent periplasmic transporter DctQ
Tripartite ATP-independent periplasmic transporter, DctQ component {ECO:0000313|EMBL:ABE59825.1}; TaxID=290398 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Chromohalobacter.;" source="Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB; 13768).;"
SCNpilot_cont_750_p_scaffold_5867_2
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

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634..1914
DNA (1281bp) protein (427aa)
C4-dicarboxylate ABC transporter permease n=1 Tax=Amorphus coralli RepID=UPI0003693158
TRAP dicarboxylate transporter subunit DctM {ECO:0000313|EMBL:KEZ79277.1}; TaxID=1304275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera hydrothermalis C41B8.;"
TRAP dicarboxylate transporter subunit DctM rbh
SCNpilot_cont_750_p_scaffold_5867_3
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1924..2727
DNA (804bp) protein (268aa)
NAD dependent epimerase/dehydratase family protein n=1 Tax=Rhizobium sp. AP16 RepID=J2WTU0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:GAJ95223.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_5867_4
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2691..3221)
DNA (531bp) protein (177aa)
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CWG5_VARPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS18720.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCNpilot_cont_750_p_scaffold_5867_5
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3218..3433)
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI0003744746
Uncharacterized protein {ECO:0000313|EMBL:KGE80210.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_5867_trna_1
unknown

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comp(3804..3874)
DNA (71bp)
transferRNA
SCNpilot_cont_750_p_scaffold_5867_6
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4067..5743
DNA (1677bp) protein (559aa)
major facilitator transporter n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031E6732
Major facilitator superfamily transporter {ECO:0000313|EMBL:EKF18549.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
major facilitator transporter
SCNpilot_cont_750_p_scaffold_5867_7
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5780..6502)
DNA (723bp) protein (241aa)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M8U2_9RHIZ
23S rRNA methylase
SCNpilot_cont_750_p_scaffold_5867_8
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6496..7899)
DNA (1404bp) protein (468aa)
Ppx/GppA phosphatase; K01524 exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
Ppx/GppA phosphatase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSK6_9RHIZ
Ppx/GppA phosphatase {ECO:0000313|EMBL:EHK56292.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
SCNpilot_cont_750_p_scaffold_5867_9
unknown

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8029..8280
DNA (252bp) protein (84aa)

This feature has no annotations

Displaying 10 items

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