ggKbase home page

SCNpilot_cont_750_p_scaffold_12265

Search features with annotation key words

Displaying 9 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_12265_1
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..310
DNA (309bp) protein (103aa)
Putative transposase for insertion sequence element n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J5V2_ACIMA
putative transposase for insertion sequence element
Putative transposase for insertion sequence element {ECO:0000313|EMBL:BAJ82496.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
SCNpilot_cont_750_p_scaffold_12265_2
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1196..1450
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Herbaspirillum seropedicae RepID=UPI00037E4141
plasmid stability protein-like protein
Plasmid stability protein, putative {ECO:0000313|EMBL:ACK77928.1}; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP; 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)).;"
SCNpilot_cont_750_p_scaffold_12265_3
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1450..1872
DNA (423bp) protein (141aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
Ribonuclease VapC n=1 Tax=gamma proteobacterium HdN1 RepID=E1VKV0_9GAMM
vapC4; nucleic acid-binding protein; K07062
SCNpilot_cont_750_p_scaffold_12265_4
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1869..2480
DNA (612bp) protein (204aa)
DNA invertase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0IW19_9SPHN
DNA invertase {ECO:0000313|EMBL:EQB16050.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
invertase/recombinase protein
SCNpilot_cont_750_p_scaffold_12265_5
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2761..3096
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0J280_9SPHN
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
putative single-strand binding protein/primosomal replication protein
SCNpilot_cont_750_p_scaffold_12265_6
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3344..4027
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0IW37_9SPHN
Chromosome partitioning protein {ECO:0000313|EMBL:EZP56485.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
chromosome partitioning ATPase; K03496 chromosome partitioning protein
SCNpilot_cont_750_p_scaffold_12265_7
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4024..4359
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HI90_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB16066.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
SCNpilot_cont_750_p_scaffold_12265_8
unknown

Not on your lists

comp(4382..4627)
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_12265_9
Hyphomonas oceanitis, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4675..5073)
DNA (399bp) protein (133aa)
Transposase of ISMex15, IS5 family (ORF 1) n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3H3Y2_9RHIZ
Putative transposase {ECO:0000313|EMBL:KDA00352.1}; TaxID=1280953 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas oceanitis SCH89.;"
putative transposase
Displaying 9 items

View Taxonomy