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SCNpilot_cont_750_p_scaffold_951

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Displaying items 1-30 of 41 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_951_1
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53..712)
DNA (660bp) protein (220aa)
Putative transposase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YBX6_9SPHN
IstB domain-containing protein ATP-binding protein {ECO:0000313|EMBL:KHS41774.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
transposase
SCNpilot_cont_750_p_scaffold_951_2
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(724..2250)
DNA (1527bp) protein (509aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HCY3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB09998.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
transposase rbh
SCNpilot_cont_750_p_scaffold_951_3
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2349..3440)
DNA (1092bp) protein (364aa)
Putative transposase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J3H5_ACIMA
putative transposase rbh
Putative transposase {ECO:0000313|EMBL:BAJ79831.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
SCNpilot_cont_750_p_scaffold_951_4
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3594..4043
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0003766A81
response regulator receiver protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
SCNpilot_cont_750_p_scaffold_951_5
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4057..5187)
DNA (1131bp) protein (377aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00035E54DB
MFS transporter {ECO:0000313|EMBL:EXS70681.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
major facilitator superfamily protein
SCNpilot_cont_750_p_scaffold_951_6
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5280..6191)
DNA (912bp) protein (304aa)
copper resistance protein CopB n=1 Tax=Sphingobium xenophagum RepID=UPI000360A439
Copper resistance protein CopB {ECO:0000313|EMBL:KFL44715.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. ba1.;"
copper resistance protein CopB rbh
SCNpilot_cont_750_p_scaffold_951_7
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6188..7873)
DNA (1686bp) protein (562aa)
CopA family copper-resistance protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CKS0_SPHYA
Copper-resistance protein CopA {ECO:0000313|EMBL:KHS49621.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
copA; copper resistance protein CopA rbh
SCNpilot_cont_750_p_scaffold_951_8
unknown

Not on your lists

8025..8240
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_951_9
unknown

Not on your lists

8978..9178
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_951_10
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9456..9815)
DNA (360bp) protein (120aa)
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
SCNpilot_cont_750_p_scaffold_951_11
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9827..10279)
DNA (453bp) protein (151aa)
MerR family transcriptional regulator n=1 Tax=Sphingobium baderi LL03 RepID=T0GTR1_9SPHN
MerR family transcriptional regulator; K13638 MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
SCNpilot_cont_750_p_scaffold_951_12
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10424..10768)
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003A7BC10
Uncharacterized protein {ECO:0000313|EMBL:AJR26740.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_951_13
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10870..11232)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Sphingobium sp. YL23 RepID=UPI00039B2E87
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
SCNpilot_cont_750_p_scaffold_951_14
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11349..12836)
DNA (1488bp) protein (496aa)
Beta-Casp domain-containing protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GAD8_9SPHN
putative exonuclease; K07576 metallo-beta-lactamase family protein rbh
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
SCNpilot_cont_750_p_scaffold_951_15
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13203..13859
DNA (657bp) protein (219aa)
Putative Rossmann fold nucleotide-binding protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YLZ6_9RHIZ
hypothetical protein; K06966
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
SCNpilot_cont_750_p_scaffold_951_16
unknown

Not on your lists

14006..14320
DNA (315bp) protein (105aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_951_17
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14440..14658)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GVV6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB04083.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_951_18
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14853..16172
DNA (1320bp) protein (440aa)
type II restriction enzyme NmeDIP n=1 Tax=Sphingomonas melonis RepID=UPI000367A04F
Sphingomonas taxi strain 30a NODE_16, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26885.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_951_19
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16263..16505
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XM23_VARPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGU53643.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_750_p_scaffold_951_20
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16502..17164
DNA (663bp) protein (221aa)
Isoprenylcysteine carboxyl methyltransferase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IPZ9_XANP2
Isoprenylcysteine carboxyl methyltransferase {ECO:0000313|EMBL:EXS68577.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
isoprenylcysteine carboxyl methyltransferase
SCNpilot_cont_750_p_scaffold_951_21
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17493..17924
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0I0I4_9SPHN
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
SCNpilot_cont_750_p_scaffold_951_22
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17921..18295
DNA (375bp) protein (125aa)
UPI0003D6161D related cluster n=1 Tax=unknown RepID=UPI0003D6161D
Uncharacterized protein {ECO:0000313|EMBL:KKC24162.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
SCNpilot_cont_750_p_scaffold_951_23
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18306..20297
DNA (1992bp) protein (664aa)
UPI0003D5EE6E related cluster n=1 Tax=unknown RepID=UPI0003D5EE6E
FAD-binding oxidoreductase {ECO:0000313|EMBL:ETI65131.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
hypothetical protein rbh
SCNpilot_cont_750_p_scaffold_951_24
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20297..20980
DNA (684bp) protein (228aa)
iron reductase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC08B
Iron reductase {ECO:0000313|EMBL:ETI65130.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_951_25
unknown

Not on your lists

comp(21115..21411)
DNA (297bp) protein (99aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_951_26
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21541..21672
DNA (132bp) protein (44aa)
class III cytochrome C family protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC08A
Class III cytochrome C family protein {ECO:0000313|EMBL:KKC24165.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_951_27
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22114..22710)
DNA (597bp) protein (199aa)
Cytochrome C n=1 Tax=Sphingobium baderi LL03 RepID=T0I1N1_9SPHN
Cytochrome C {ECO:0000313|EMBL:KEZ15191.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
cytochrome c family protein
SCNpilot_cont_750_p_scaffold_951_28
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23357..24286
DNA (930bp) protein (310aa)
pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CDAF3
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EQB05580.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
FAD dependent pyridine nucleotide-disulfide oxidoreductase protein
SCNpilot_cont_750_p_scaffold_951_29
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24322..24450
DNA (129bp) protein (43aa)
Chromosome (Plasmid) partitioning protein ParB / Stage 0 sporulation protein J n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MJJ7_9SPHN
Integrase {ECO:0000313|EMBL:KKC26215.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
transposase, orfB
SCNpilot_cont_750_p_scaffold_951_30
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24762..27185
DNA (2424bp) protein (808aa)
glycosyl transferase family 1 n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489C3A
Glycosyl transferase family 1 {ECO:0000313|EMBL:ETI65127.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
group 1 glycosyl transferase
Displaying items 1-30 of 41 in total

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