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SCNpilot_cont_750_p_scaffold_1481

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Displaying items 1-30 of 48 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_1481_1
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..121)
DNA (120bp) protein (40aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D74238
Uncharacterized protein {ECO:0000313|EMBL:CDX39701.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_1481_2
unknown

Not on your lists

comp(469..693)
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_1481_3
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(693..1133)
DNA (441bp) protein (147aa)
Uncharacterized protein n=2 Tax=Sphingobium RepID=D4Z965_SPHJU
Uncharacterized protein {ECO:0000313|EMBL:KEZ17825.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_1481_4
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1276..1443)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VTK3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CEG10426.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_1481_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1609..2097)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WNF7_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD41263.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_1481_6
unknown

Not on your lists

2145..2258
DNA (114bp) protein (38aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_1481_7
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2273..2770
DNA (498bp) protein (166aa)
Putative transcriptional regulator, MarR family n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PSX1_9RHIZ
MarR family transcriptional regulator protein {ECO:0000313|EMBL:AIC27185.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;"
putative transcriptional regulator, MarR family
SCNpilot_cont_750_p_scaffold_1481_8
Sphingobium sp. HDIP04, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2907..3830)
DNA (924bp) protein (308aa)
Uncharacterized protein n=2 Tax=Sphingobium RepID=D4Z969_SPHJU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQB07227.1}; TaxID=428994 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. HDIP04.;"
SCNpilot_cont_750_p_scaffold_1481_9
Paracoccus sp. 39524, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4143..5180)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HRQ0_9RHIZ
DNA primase {ECO:0000313|EMBL:KGJ18048.1}; TaxID=1525718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 39524.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_1481_10
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5180..9508)
DNA (4329bp) protein (1443aa)
Phospholipid N-methyltransferase n=1 Tax=Phyllobacterium sp. YR531 RepID=J3CDJ9_9RHIZ
Methylase {ECO:0000313|EMBL:KEQ52210.1}; Flags: Precursor;; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
putative methylase/helicase
SCNpilot_cont_750_p_scaffold_1481_11
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9729..10085
DNA (357bp) protein (119aa)
Uncharacterized protein n=3 Tax=Sphingobium RepID=D4Z973_SPHJU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQB33747.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
SCNpilot_cont_750_p_scaffold_1481_12
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10064..10516
DNA (453bp) protein (151aa)
UPI0003D59DC9 related cluster n=1 Tax=unknown RepID=UPI0003D59DC9
Uncharacterized protein {ECO:0000313|EMBL:KEQ52206.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_1481_13
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10489..10710)
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037A9AFE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ68748.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_750_p_scaffold_1481_14
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10707..11108)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036806B2
Uncharacterized protein {ECO:0000313|EMBL:EJU09111.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_1481_15
Sphingobium sp. HDIP04, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11181..11402)
DNA (222bp) protein (74aa)
Uncharacterized protein n=3 Tax=Sphingobium RepID=D4Z978_SPHJU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQB07343.1}; TaxID=428994 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. HDIP04.;"
SCNpilot_cont_750_p_scaffold_1481_16
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11462..13540)
DNA (2079bp) protein (693aa)
Putative transcriptional regulator n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HRC6_9RHIZ
Plasmid partitioning protein ParB {ECO:0000313|EMBL:KEQ52202.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
ParB-like protein; K03497 chromosome partitioning protein, ParB family
SCNpilot_cont_750_p_scaffold_1481_17
unknown

Not on your lists

comp(13543..13698)
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_1481_18
Sphingobium sp. HDIP04, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13698..13991)
DNA (294bp) protein (98aa)
Single-stranded DNA endonuclease n=3 Tax=Sphingobium RepID=T0H338_9SPHN
putative lipoprotein
Single-stranded DNA endonuclease {ECO:0000313|EMBL:EQB07347.1}; TaxID=428994 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. HDIP04.;"
SCNpilot_cont_750_p_scaffold_1481_19
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14064..15026)
DNA (963bp) protein (321aa)
Putative ardC antirestriction protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ESW3_BRASB
ardC antirestriction protein
Putative ardC antirestriction protein {ECO:0000313|EMBL:ABQ39257.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCNpilot_cont_750_p_scaffold_1481_20
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15298..17181
DNA (1884bp) protein (628aa)
Diguanylate cyclase n=1 Tax=Sphingobium ummariense RL-3 RepID=T0IY86_9SPHN
Diguanylate cyclase {ECO:0000313|EMBL:EQB33765.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
putative signal transduction protein rbh
SCNpilot_cont_750_p_scaffold_1481_21
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17314..17877)
DNA (564bp) protein (188aa)
AraC family transcriptional regulator n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI00036979DC
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ACB96201.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCNpilot_cont_750_p_scaffold_1481_22
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18024..18935)
DNA (912bp) protein (304aa)
Transcriptional regulator, LysR family n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SV74_CAUSK
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABZ72964.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_750_p_scaffold_1481_23
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18958..20217)
DNA (1260bp) protein (420aa)
MFS transporter n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI0002881485
Putative major facilitator superfamily transporter {ECO:0000313|EMBL:GAM01031.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
major facilitator transporter; K08156 MFS transporter, DHA1 family, arabinose polymer transporter
SCNpilot_cont_750_p_scaffold_1481_24
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20229..20864)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RHD7_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EFH13277.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
DsbA-like thioredoxin domain-containing protein
SCNpilot_cont_750_p_scaffold_1481_25
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20941..21855)
DNA (915bp) protein (305aa)
Putative transcriptional regulator n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9HD83_GLUDA
nmrA; transcriptional regulator rbh
Putative transcriptional regulator {ECO:0000313|EMBL:CAP55065.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCNpilot_cont_750_p_scaffold_1481_26
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21882..22499)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V2I6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN85317.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
polyketide biosynthesis dithiol-disulfide isomerase
SCNpilot_cont_750_p_scaffold_1481_27
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22521..23156)
DNA (636bp) protein (212aa)
FMN-dependent NADH-azoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; EC=1.7.-.- {ECO:0000256|HAMAP-Rule:MF_01216};; Azo-dye reductase {ECO:0000256|HAMAP-Rule:MF_01216}; FMN-dependent NADH-azo compound oxidoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
acpD; ACP phosphodiesterase; K01118 FMN-dependent NADH-azoreductase [EC:1.7.-.-]
FMN-dependent NADH-azoreductase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U4Q0_9RHIZ
SCNpilot_cont_750_p_scaffold_1481_28
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23234..23665
DNA (432bp) protein (144aa)
Putative HTH-type transcriptional regulator n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9HD80_GLUDA
ytfH; HTH-type transcriptional regulator
Putative HTH-type transcriptional regulator {ECO:0000313|EMBL:CAP55064.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCNpilot_cont_750_p_scaffold_1481_29

Not on your lists

23809..24264
DNA (456bp) protein (152aa)
glyoxalase n=2 Tax=Caulobacter RepID=UPI00036B215C
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:KKS95263.1}; TaxID=1618443 species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011_GWA2_43_14.;"
glyoxalase/bleomycin resistance protein/dioxygenase
SCNpilot_cont_750_p_scaffold_1481_30
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24328..24687)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036B1595
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:ABZ72924.1}; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
Displaying items 1-30 of 48 in total

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