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SCNpilot_cont_750_p_scaffold_29

Search features with annotation key words

Displaying items 1-30 of 501 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_29_1
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(219..1013)
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003819E97
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADW70009.1}; Flags: Precursor;; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
SCNpilot_cont_750_p_scaffold_29_2
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(1269..2360)
DNA (1092bp) protein (364aa)
isocitrate dehydrogenase; K00030 isocitrate dehydrogenase (NAD+) [EC:1.1.1.41] rbh
Isocitrate dehydrogenase (NAD(+)) {ECO:0000313|EMBL:AEU37975.1}; EC=1.1.1.41 {ECO:0000313|EMBL:AEU37975.1};; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
isocitrate dehydrogenase n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037F1995
SCNpilot_cont_750_p_scaffold_29_3
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(2363..2836)
DNA (474bp) protein (158aa)
NrdR family transcriptional regulator n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00036436DB
transcriptional regulator NrdR
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63).;"
SCNpilot_cont_750_p_scaffold_29_4
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(3107..4156)
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00036966EB
hypothetical protein; K07027 rbh
Uncharacterized protein {ECO:0000313|EMBL:ADV81697.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4).;"
SCNpilot_cont_750_p_scaffold_29_5
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(4649..5365)
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003808830
Lytic transglycosylase catalytic
Lytic transglycosylase catalytic {ECO:0000313|EMBL:AEU37972.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
SCNpilot_cont_750_p_scaffold_29_6
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(5967..6905)
DNA (939bp) protein (313aa)
haloacid dehalogenase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B76498
HAD superfamily hydrolase; K07024 rbh
HAD-superfamily hydrolase, subfamily IIB {ECO:0000313|EMBL:ADW70004.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
SCNpilot_cont_750_p_scaffold_29_7
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(7076..7996)
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003755B0C
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEU37966.1}; Flags: Precursor;; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
SCNpilot_cont_750_p_scaffold_29_8
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

8281..8616
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003725AFB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW70573.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
SCNpilot_cont_750_p_scaffold_29_9
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

8639..9628
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000368FE4A
hypothetical protein; K06966 rbh
Uncharacterized protein {ECO:0000313|EMBL:AEU34824.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
SCNpilot_cont_750_p_scaffold_29_10
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

9997..11169
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B44E4B
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACO32374.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
SCNpilot_cont_750_p_scaffold_29_11
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

11301..12485
DNA (1185bp) protein (395aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037A7D10
group 1 glycosyl transferase rbh
Glycosyl transferase group 1 {ECO:0000313|EMBL:AEU34826.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
SCNpilot_cont_750_p_scaffold_29_12
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(12716..14824)
DNA (2109bp) protein (703aa)
neprilysin; K07386 putative endopeptidase [EC:3.4.24.-] rbh
Neprilysin {ECO:0000313|EMBL:AEU37965.1}; EC=3.4.24.11 {ECO:0000313|EMBL:AEU37965.1};; Flags: Precursor;; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000373B0A5
SCNpilot_cont_750_p_scaffold_29_13
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

14992..16623
DNA (1632bp) protein (544aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B6B764
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADW69999.1}; Flags: Precursor;; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
SCNpilot_cont_750_p_scaffold_29_14
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists


comp(16977..17252)
DNA (276bp) protein (92aa)
30S ribosomal protein S20 n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B693D1
30S ribosomal protein S20; K02968 small subunit ribosomal protein S20
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
SCNpilot_cont_750_p_scaffold_29_15
unknown

Not on your lists

17455..17724
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_29_16
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17721..18101
DNA (381bp) protein (127aa)
Glutamate-rich protein grpB n=1 Tax=Bacillus cereus MM3 RepID=C2PFM2_BACCE
hypothetical protein
Glutamate-rich protein grpB {ECO:0000313|EMBL:EEK67283.1}; TaxID=526971 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus MM3.;"
SCNpilot_cont_750_p_scaffold_29_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18292..18825
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WW24_ACISM
DinB-like domain protein {ECO:0000313|EMBL:AHG88849.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_29_18
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

19058..20101
DNA (1044bp) protein (348aa)
phosphate starvation protein PhoH n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B32C8F
PhoH family protein; K06217 phosphate starvation-inducible protein PhoH and related proteins rbh
PhoH family protein {ECO:0000313|EMBL:ADW69995.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
SCNpilot_cont_750_p_scaffold_29_19
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20163..20909
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46P91_CUPPJ
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAZ65043.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
SCNpilot_cont_750_p_scaffold_29_20
Paenibacillus sp. P22, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20993..21940
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000374B4BB
Beta-glucanase/beta-glucan synthetase {ECO:0000313|EMBL:CDN41548.1}; TaxID=483908 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. P22.;"
glycoside hydrolase family protein rbh
SCNpilot_cont_750_p_scaffold_29_21
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

21937..22428
DNA (492bp) protein (164aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009};; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
Endoribonuclease YbeY n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WZM0_ACISM
hypothetical protein; K07042 probable rRNA maturation factor
SCNpilot_cont_750_p_scaffold_29_22
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

22425..23801
DNA (1377bp) protein (459aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00036EAB0E
hypothetical protein rbh
CBS domain containing protein {ECO:0000313|EMBL:ADW69993.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
SCNpilot_cont_750_p_scaffold_29_23
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(24008..25027)
DNA (1020bp) protein (340aa)
rod shape-determining protein Mbl n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00036E2128
MreB/Mrl family cell shape determining protein; K03569 rod shape-determining protein MreB and related proteins rbh
Cell shape determining protein, MreB/Mrl family {ECO:0000313|EMBL:AEU37953.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
SCNpilot_cont_750_p_scaffold_29_24
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(25162..26343)
DNA (1182bp) protein (394aa)
acyltransferase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B4332F
acyltransferase 3 rbh
Acyltransferase 3 {ECO:0000313|EMBL:AEU36876.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
SCNpilot_cont_750_p_scaffold_29_25
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

26464..27579
DNA (1116bp) protein (372aa)
alanine dehydrogenase (EC:1.4.1.1); K00259 alanine dehydrogenase [EC:1.4.1.1] rbh
Alanine dehydrogenase {ECO:0000256|PIRNR:PIRNR000183}; EC=1.4.1.1 {ECO:0000256|PIRNR:PIRNR000183};; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
alanine dehydrogenase n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003603CDB
SCNpilot_cont_750_p_scaffold_29_26
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

27829..30288
DNA (2460bp) protein (820aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000373DD6C
multi-sensor signal transduction histidine kinase rbh
SCNpilot_cont_750_p_scaffold_29_27
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

30285..31673
DNA (1389bp) protein (463aa)
phage repressor protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000365E7CB
two component, sigma54 specific, transcriptional regulator, Fis family; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX rbh
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ADW67950.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
SCNpilot_cont_750_p_scaffold_29_28
unknown

Not on your lists

31750..31974
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_29_29
Mesorhizobium sp. L103C120A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31975..32409
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003762B42
Uncharacterized protein {ECO:0000313|EMBL:ESZ65250.1}; TaxID=1287086 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C120A0.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_29_30
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(32443..33483)
DNA (1041bp) protein (347aa)
GTP-binding protein Era n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000369BF8E
GTP-binding protein Era; K03595 GTP-binding protein Era rbh
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
Displaying items 1-30 of 501 in total

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