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SCNpilot_cont_750_p_scaffold_1530

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Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_1530_1
unknown

Not on your lists

3..269
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_1530_2
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(454..1521)
DNA (1068bp) protein (356aa)
Calcium/proton exchanger n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7QMJ7_METSZ
Calcium/proton exchanger rbh
Calcium/proton exchanger {ECO:0000313|EMBL:CCJ06433.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
SCNpilot_cont_750_p_scaffold_1530_3
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1833..2987)
DNA (1155bp) protein (385aa)
galactonate dehydratase n=1 Tax=Kaistia granuli RepID=UPI0003763BD1
Galactonate dehydratase {ECO:0000313|EMBL:KGM35074.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
mandelate racemase/muconate lactonizing protein rbh
SCNpilot_cont_750_p_scaffold_1530_4
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3007..4104)
DNA (1098bp) protein (366aa)
sugar ABC transporter ATP-binding protein n=1 Tax=Kaistia granuli RepID=UPI0003795A3B
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKC34099.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
ABC transporter ATP-binding protein; K02023 multiple sugar transport system ATP-binding protein rbh
SCNpilot_cont_750_p_scaffold_1530_5
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4116..5006)
DNA (891bp) protein (297aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EW20_9RHIZ
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CCV08432.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
ABC-type sugar transport system, permease component rbh
SCNpilot_cont_750_p_scaffold_1530_6
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5003..5962)
DNA (960bp) protein (320aa)
UPI0003D008E6 related cluster n=1 Tax=unknown RepID=UPI0003D008E6
Sugar ABC transporter permease {ECO:0000313|EMBL:ESZ21473.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
transmembrane component of ABC transporter; K02025 multiple sugar transport system permease protein rbh
SCNpilot_cont_750_p_scaffold_1530_7
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6042..7526)
DNA (1485bp) protein (495aa)
UPI0003CEFE8E related cluster n=1 Tax=unknown RepID=UPI0003CEFE8E
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESW79193.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
ABC-type sugar transport system, periplasmic component rbh
SCNpilot_cont_750_p_scaffold_1530_8
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7736..8449
DNA (714bp) protein (238aa)
UPI0003CDF5EE related cluster n=1 Tax=unknown RepID=UPI0003CDF5EE
GntR family transcriptional regulator {ECO:0000313|EMBL:ESY86921.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
transcriptional regulator rbh
SCNpilot_cont_750_p_scaffold_1530_9
Mesorhizobium sp. L2C089B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8498..9661
DNA (1164bp) protein (388aa)
Mandelate racemase n=1 Tax=Mesorhizobium sp. L2C089B000 RepID=V7H872_9RHIZ
Mandelate racemase {ECO:0000313|EMBL:ESZ08208.1}; TaxID=1287120 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C089B000.;"
mandelate racemase/muconate lactonising family protein rbh
SCNpilot_cont_750_p_scaffold_1530_10
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9726..11084
DNA (1359bp) protein (453aa)
mandelate racemase n=1 Tax=Rhizobium leguminosarum RepID=UPI0003680607
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:CDN49113.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
Mandelate racemase/muconate lactonizing protein rbh
SCNpilot_cont_750_p_scaffold_1530_11
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11101..12303
DNA (1203bp) protein (401aa)
Enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMZ5_9RHIZ
Enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase {ECO:0000313|EMBL:EIM25337.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
Mandelate racemase/muconate lactonizing protein rbh
SCNpilot_cont_750_p_scaffold_1530_12
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12337..12636
DNA (300bp) protein (100aa)
Excinuclease ABC protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6J0J2_9RHOB
GIY-YIG nuclease {ECO:0000313|EMBL:KKB06838.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein; K07461 putative endonuclease
SCNpilot_cont_750_p_scaffold_1530_13
unknown

Not on your lists

comp(12665..13351)
DNA (687bp) protein (229aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_1530_14
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13421..14305)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XZR2_SORCE
Ribokinase {ECO:0000313|EMBL:KFL25455.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
hypothetical protein rbh
SCNpilot_cont_750_p_scaffold_1530_15
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14302..15228)
DNA (927bp) protein (309aa)
Pseudouridine-5'-phosphate glycosidase {ECO:0000256|HAMAP-Rule:MF_01876}; Short=PsiMP glycosidase {ECO:0000256|HAMAP-Rule:MF_01876};; EC=4.2.1.70 {ECO:0000256|HAMAP-Rule:MF_01876};; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
Pseudouridine-5'-phosphate glycosidase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=PSUG_SORC5
hypothetical protein rbh
SCNpilot_cont_750_p_scaffold_1530_16
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15601..16695
DNA (1095bp) protein (365aa)
Putrescine-binding periplasmic protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REC4_PELHB
putrescine ABC transporter putrescine-binding protein PotF; K11073 putrescine transport system substrate-binding protein rbh
Putrescine-binding periplasmic protein {ECO:0000256|PIRNR:PIRNR019574}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
SCNpilot_cont_750_p_scaffold_1530_17
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16753..17913
DNA (1161bp) protein (387aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
Putrescine transport ATP-binding protein PotG n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REC5_PELHB
putrescine transport ATP-binding protein PotG; K11076 putrescine transport system ATP-binding protein rbh
SCNpilot_cont_750_p_scaffold_1530_18
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17853..18869
DNA (1017bp) protein (339aa)
Putrescine transport system permease protein PotH n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REC6_PELHB
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:KFL25451.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
putrescine transport system permease protein PotH; K11075 putrescine transport system permease protein rbh
SCNpilot_cont_750_p_scaffold_1530_19
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18870..19676
DNA (807bp) protein (269aa)
Putrescine transport system permease protein PotI n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REC7_PELHB
Putrescine transport system permease protein PotI {ECO:0000313|EMBL:CDP53734.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
putrescine transport system permease protein PotI; K11074 putrescine transport system permease protein rbh
SCNpilot_cont_750_p_scaffold_1530_20
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19827..20846
DNA (1020bp) protein (340aa)
Putative exported protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REG4_PELHB
Probable exported protein STY0357 {ECO:0000313|EMBL:CDP51816.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein rbh
SCNpilot_cont_750_p_scaffold_1530_21
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20984..21742
DNA (759bp) protein (253aa)
GK23094 n=1 Tax=Drosophila willistoni RepID=B4NMF1_DROWI
Uncharacterized protein {ECO:0000313|EMBL:KKB85290.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
GK23094 gene product from transcript GK23094-RA
SCNpilot_cont_750_p_scaffold_1530_22
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21761..22081)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NPR8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF39849.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_1530_23
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22194..22535
DNA (342bp) protein (114aa)
Putative uncharacterized protein n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0G1D2_RHIML
Putative uncharacterized protein {ECO:0000313|EMBL:EHK76904.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_1530_24
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22532..22843
DNA (312bp) protein (104aa)
XRE family transcriptional regulator n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0G1D1_RHIML
XRE family transcriptional regulator {ECO:0000313|EMBL:EHK76903.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
XRE family transcriptional regulator; K07726 putative transcriptional regulator
SCNpilot_cont_750_p_scaffold_1530_25
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22868..24664)
DNA (1797bp) protein (599aa)
Protein translocase subunit SecA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REF6_PELHB
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
secA; preprotein translocase subunit SecA; K03070 preprotein translocase subunit SecA
Displaying 25 items

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