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SCNpilot_cont_750_p_scaffold_523

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Displaying items 1-30 of 133 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_523_1
Burkholderia sp. MSHR3999, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..908)
DNA (906bp) protein (302aa)
Glycosyl transferase, group 1 n=1 Tax=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) RepID=Q0BHQ6_BURCM
group 1 glycosyl transferase
KY49.ctg7180000000014_quiver, whole genome shotgun sequence {ECO:0000313|EMBL:KIP18926.1}; TaxID=1542965 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MSHR3999.;"
SCNpilot_cont_750_p_scaffold_523_2
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(892..2556)
DNA (1665bp) protein (555aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8B1K1_AZOBR
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
SCNpilot_cont_750_p_scaffold_523_3
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2876..4288
DNA (1413bp) protein (471aa)
mannose-1-phosphate guanyltransferase n=1 Tax=Dyella ginsengisoli RepID=UPI0003470953
Mannose-1-phosphate guanyltransferase {ECO:0000313|EMBL:GAN45669.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
SCNpilot_cont_750_p_scaffold_523_4
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4431..5654)
DNA (1224bp) protein (408aa)
Probable abc transporter atp-binding protein n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UFM5_XANAP
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:EWY36065.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
ABC transporter ATP-binding protein; K09691 lipopolysaccharide transport system ATP-binding protein
SCNpilot_cont_750_p_scaffold_523_5
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5651..6445)
DNA (795bp) protein (265aa)
ABC-2 type transporter family protein n=1 Tax=Pseudomonas putida S610 RepID=V6J3N3_PSEPU
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
hypothetical protein; K09690 lipopolysaccharide transport system permease protein
SCNpilot_cont_750_p_scaffold_523_6

Not on your lists

comp(6620..7822)
DNA (1203bp) protein (401aa)
Glycosyltransferase (Fragment) n=1 Tax=mine drainage metagenome RepID=T0ZD41_9ZZZZ
Glycosyltransferase {ECO:0000313|EMBL:EQD42958.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein rbh
SCNpilot_cont_750_p_scaffold_523_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8080..9243)
DNA (1164bp) protein (388aa)
cystathionine beta-lyase/cystathionine gamma-synthase (EC:4.4.1.1) rbh
Cystathionine beta-lyase/cystathionine gamma-synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WG51_9GAMM
Cystathionine beta-lyase/cystathionine gamma-synthase {ECO:0000313|EMBL:EIL98442.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_cont_750_p_scaffold_523_8
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9274..9702)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VDE5_SPHWW
Uncharacterized protein {ECO:0000313|EMBL:KKC24725.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_523_9
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10418..11785)
DNA (1368bp) protein (456aa)
cysteine synthase (EC:4.2.1.22)
cystathionine beta-synthase n=1 Tax=Dyella japonica RepID=UPI00031202F2
Cystathionine beta-synthase {ECO:0000313|EMBL:AIF49393.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCNpilot_cont_750_p_scaffold_523_10
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11872..12855)
DNA (984bp) protein (328aa)
Family 2 glycosyl transferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VJS4_9GAMM
Family 2 glycosyl transferase {ECO:0000313|EMBL:EIL87465.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
family 2 glycosyl transferase
SCNpilot_cont_750_p_scaffold_523_11
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12958..13179)
DNA (222bp) protein (74aa)
UptF protein n=1 Tax=Dyella japonica RepID=UPI0003077BC7
Uncharacterized protein {ECO:0000313|EMBL:GAN45671.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_523_12
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13441..14331)
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034D6121
Uncharacterized protein {ECO:0000313|EMBL:GAN45672.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_523_13
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14328..14909)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VWW4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91705.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_523_14
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14936..15883
DNA (948bp) protein (316aa)
Twitching motility protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1E4_9GAMM
Twitching motility protein PilT {ECO:0000313|EMBL:GAN45673.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
pilus retraction protein PilT rbh
SCNpilot_cont_750_p_scaffold_523_15
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16586..18430)
DNA (1845bp) protein (615aa)
Protease 4 {ECO:0000256|PIRNR:PIRNR001217}; EC=3.4.21.- {ECO:0000256|PIRNR:PIRNR001217};; Endopeptidase IV {ECO:0000256|PIRNR:PIRNR001217}; Protease IV {ECO:0000256|PIRNR:PIRNR001217}; Signal peptide peptidase {ECO:0000256|PIRNR:PIRNR001217}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
endopeptidase IV n=1 Tax=Dyella ginsengisoli RepID=UPI000344A893
signal peptide peptidase SppA, 67K type
SCNpilot_cont_750_p_scaffold_523_16
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18492..19895)
DNA (1404bp) protein (468aa)
Putative efflux protein, MATE family n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VTQ7_9GAMM
Multidrug transporter MatE {ECO:0000313|EMBL:GAN45838.1}; Flags: Fragment;; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
putative efflux protein, MATE family
SCNpilot_cont_750_p_scaffold_523_17
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19910..20962
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Rheinheimera perlucida RepID=UPI00037447B9
Uncharacterized protein {ECO:0000313|EMBL:AHX14722.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
Protein of unknown function (DUF3667)
SCNpilot_cont_750_p_scaffold_523_18
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20959..21261
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B51FA0
hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCNpilot_cont_750_p_scaffold_523_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21566..23785
DNA (2220bp) protein (740aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Primosome assembly protein PriA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VTQ9_9GAMM
replication restart DNA helicase PriA
SCNpilot_cont_750_p_scaffold_523_20
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24017..24874)
DNA (858bp) protein (286aa)
RNA polymerase sigma 70 n=1 Tax=Dyella ginsengisoli RepID=UPI00034DE003
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
alternative sigma factor RpoH; K03089 RNA polymerase sigma-32 factor
SCNpilot_cont_750_p_scaffold_523_21
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25128..25838)
DNA (711bp) protein (237aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Uracil-DNA glycosylase (EC:3.2.2.-)
Uracil-DNA glycosylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WX87_9GAMM
SCNpilot_cont_750_p_scaffold_523_22
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25974..26807)
DNA (834bp) protein (278aa)
Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Rhodanobacter denitrificans RepID=I4WX88_9GAMM
Histidine kinase {ECO:0000313|EMBL:GAN45508.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
response regulator containing a CheY-like receiver domain and a GGDEF domain
SCNpilot_cont_750_p_scaffold_523_23
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26841..27752)
DNA (912bp) protein (304aa)
Cell division protein FtsX n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WTA7_9GAMM
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
cell division protein
SCNpilot_cont_750_p_scaffold_523_24
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27749..28426)
DNA (678bp) protein (226aa)
Cell division ATP-binding protein FtsE n=2 Tax=Rhodanobacter denitrificans RepID=M4NSX7_9GAMM
ABC transporter {ECO:0000313|EMBL:KGI78798.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
cell division ATP-binding protein FtsE
SCNpilot_cont_750_p_scaffold_523_25
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28733..30073)
DNA (1341bp) protein (447aa)
ATP-dependent RNA helicase RhlB {ECO:0000256|SAAS:SAAS00011806}; EC=3.6.4.13 {ECO:0000256|SAAS:SAAS00011808};; Flags: Fragment;; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
ATP-dependent RNA helicase RhlB n=3 Tax=mine drainage metagenome RepID=T0YRT2_9ZZZZ
DNA/RNA helicase, superfamily II
SCNpilot_cont_750_p_scaffold_523_26
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30312..30638
DNA (327bp) protein (109aa)
thioredoxin n=1 Tax=Dyella ginsengisoli RepID=UPI00034D6C81
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
thioredoxin
SCNpilot_cont_750_p_scaffold_523_27
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30915..32423
DNA (1509bp) protein (503aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB; 13370) (Acetobacter aurantius).;"
Transcription termination factor Rho n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8KZW0_FRAAD
transcription termination factor Rho; K03628 transcription termination factor Rho rbh
SCNpilot_cont_750_p_scaffold_523_28
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32443..33021
DNA (579bp) protein (193aa)
Lysine decarboxylase {ECO:0000313|EMBL:KGI78795.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein SpalD1_31164 id=2464883 bin=GWF1_Xanthomonadales_69_6 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein; K06966
SCNpilot_cont_750_p_scaffold_523_29
Synechococcus sp. PCC 6312, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

33095..33676
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037B7EA2
putative secreted Zn-dependent protease
Putative secreted Zn-dependent protease {ECO:0000313|EMBL:AFY61007.1}; Flags: Precursor;; TaxID=195253 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain ATCC 27167 / PCC 6312).;"
SCNpilot_cont_750_p_scaffold_523_30
unknown

Not on your lists

33627..33836
DNA (210bp) protein (70aa)

This feature has no annotations

Displaying items 1-30 of 133 in total

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